Resource

Id Histone_ChIP-seq/ENCSR256OORcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR256OOR [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (87 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR256OOR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (87 years)
  • date_created: 2021-01-28T04:11:00.272966+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR256OOR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (87 years) with mild cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR256OOR float

Histone_ChIP-seq_ENCSR256OOR
Histone_ChIP-seq ENCSR256OOR [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (87 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR256OOR [1.63, 12.4]
n
81,745,669
mean
4.21
sd
1.67

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 817456692.54% 76108
chr1 2922373 1.17% 2777
chr2 2973737 1.23% 2818
chr3 1214779 0.61% 1150
chr4 1624202 0.85% 1387
chr5 2108366 1.16% 1796
chr6 2928672 1.71% 2263
chr7 2123124 1.33% 1820
chr8 1722718 1.19% 1702
chr9 1224094 0.88% 1113
chr10 2528116 1.89% 2400
chr11 1558100 1.15% 1531
chr12 1904858 1.43% 1659
chr13 940473 0.82% 877
chr14 1907410 1.78% 1622
chr15 1828367 1.79% 1814
chr16 1771150 1.96% 1827
chr17 2274681 2.73% 1866
chr18 856200 1.07% 836
chr19 1769194 3.02% 1681
chr20 1581877 2.45% 1595
chr21 671983 1.44% 697
chr22 676543 1.33% 797
chrX 42634652 27.32% 40080
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 76108 220 51502 1074.07 746
global segment-length histogram

Files

Filename Size md5
ENCFF916QMC.bed.gz 1.4 MB a49cb27e1e3c6003b1a2a5fa577fde40
ENCFF916QMC.tabix.bed.gz 740.73 KB 2d4b8aa9c73e99e383e753f0202b8870
ENCFF916QMC.tabix.bed.gz.tbi 158.51 KB 16ffe9633bb7e329fb3b05313b50139f
genomic_resource.yaml 1.73 KB 42cd901d9ab7246adc62ea604553fa8d
statistics/