Resource

Id Histone_ChIP-seq/ENCSR250AAVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR250AAV [biosample_summary="Homo sapiens right atrium auricular region tissue female adult (53 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR250AAV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0006631/
  • biosample_summary: Homo sapiens right atrium auricular region tissue female adult (53 years)
  • date_created: 2017-12-06T21:03:47.686224+00:00
  • date_released: 2019-02-12
  • doi: 10.17989/ENCSR250AAV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR250AAV float

Histone_ChIP-seq_ENCSR250AAV
Histone_ChIP-seq ENCSR250AAV [biosample_summary="Homo sapiens right atrium auricular region tissue female adult (53 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR250AAV [1.38, 16.8]
n
74,345,010
mean
4.21
sd
1.74

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 743450102.31% 56683
chr1 4719631 1.90% 3859
chr1_KI270709v1_random 8843 13.23% 9
chr2 5355806 2.21% 4445
chr2_KI270716v1_random 7493 4.87% 2
chr3 4380134 2.21% 3694
chr4 4442980 2.34% 3701
chr4_GL000008v2_random 4345 2.07% 1
chr5 5108113 2.81% 3725
chr5_GL000208v1_random 9631 10.39% 11
chr6 3967655 2.32% 3312
chr7 4530179 2.84% 3199
chr8 3804095 2.62% 2999
chr9 2524591 1.82% 1995
chr9_KI270719v1_random 1941 1.10% 3
chr9_KI270720v1_random 359 0.92% 1
chr10 3658221 2.73% 2623
chr11 3455711 2.56% 2422
chr12 3584239 2.69% 2618
chr13 1959759 1.71% 1716
chr14 2023740 1.89% 1707
chr14_GL000009v2_random 331 0.16% 1
chr14_GL000194v1_random 1125 0.59% 2
chr14_GL000225v1_random 25486 12.07% 29
chr14_KI270722v1_random 16329 8.41% 13
chr14_KI270724v1_random 777 1.96% 1
chr15 1802404 1.77% 1388
chr16 1941039 2.15% 1414
chr17 1311827 1.58% 1022
chr17_GL000205v2_random 9475 5.11% 8
chr17_KI270729v1_random 116246 41.39% 36
chr17_KI270730v1_random 21899 19.46% 12
chr18 1456989 1.81% 1278
chr19 4875093 8.32% 1929
chr20 1398114 2.17% 1197
chr21 945145 2.02% 720
chr22 677592 1.33% 544
chr22_KI270732v1_random 3030 7.29% 3
chr22_KI270733v1_random 3040 1.69% 6
chr22_KI270735v1_random 6338 14.80% 6
chr22_KI270736v1_random 99453 54.67% 54
chr22_KI270737v1_random 2694 2.59% 3
chr22_KI270738v1_random 52340 52.67% 17
chrUn_GL000216v2 63986 36.23% 19
chrUn_GL000218v1 640 0.40% 1
chrUn_GL000219v1 12065 6.73% 10
chrUn_GL000220v1 762 0.47% 2
chrUn_GL000224v1 16830 9.37% 10
chrUn_KI270429v1 700 51.43% 1
chrUn_KI270435v1 8982 9.66% 7
chrUn_KI270438v1 40722 36.20% 32
chrUn_KI270442v1 144347 36.82% 79
chrUn_KI270465v1 516 29.09% 1
chrUn_KI270468v1 1066 26.29% 1
chrUn_KI270507v1 2327 43.47% 2
chrUn_KI270508v1 782 40.08% 1
chrUn_KI270509v1 876 37.79% 1
chrUn_KI270511v1 794 9.77% 1
chrUn_KI270512v1 5217 22.99% 4
chrUn_KI270517v1 1649 50.69% 1
chrUn_KI270519v1 35578 25.76% 30
chrUn_KI270522v1 794 13.99% 1
chrUn_KI270538v1 4541 4.97% 5
chrUn_KI270580v1 382 24.60% 1
chrUn_KI270584v1 1282 28.41% 1
chrUn_KI270588v1 678 11.01% 1
chrUn_KI270589v1 3068 6.90% 1
chrUn_KI270590v1 2088 44.57% 2
chrUn_KI270591v1 1822 31.44% 1
chrUn_KI270593v1 1082 35.58% 1
chrUn_KI270744v1 2365 1.40% 3
chrUn_KI270746v1 1052 1.58% 2
chrUn_KI270747v1 1027 0.52% 1
chrUn_KI270749v1 2094 1.32% 3
chrUn_KI270750v1 2161 1.45% 2
chrUn_KI270751v1 2696 1.79% 2
chrUn_KI270754v1 467 1.16% 1
chrUn_KI270756v1 6369 8.00% 4
chrUn_KI270757v1 9188 12.90% 7
chrX 5626225 3.61% 4702
chrY 23558 0.04% 14
3286 contigs with no values (123376654 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 56683 265 69184 1311.59 979
global segment-length histogram

Files

Filename Size md5
ENCFF114VBW.bed.gz 1.15 MB cad383851e3947a6c1422200991a46fa
ENCFF114VBW.tabix.bed.gz 590.02 KB 502e51bdaae8dc3e70d570474087607a
ENCFF114VBW.tabix.bed.gz.tbi 290.57 KB 87842b0f4af5ce2f768fc922723e9b6a
genomic_resource.yaml 1.57 KB 776f48d13dace17dd2464f3cd9e4e027
statistics/