Resource

Id Histone_ChIP-seq/ENCSR249INEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR249INE [biosample_summary="Homo sapiens uterus tissue female adult (53 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR249INE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000995/
  • biosample_summary: Homo sapiens uterus tissue female adult (53 years)
  • date_created: 2016-10-19T23:02:59.474564+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR249INE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR249INE float

Histone_ChIP-seq_ENCSR249INE
Histone_ChIP-seq ENCSR249INE [biosample_summary="Homo sapiens uterus tissue female adult (53 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR249INE [1.27, 66.9]
n
113,824,721
mean
12.5
sd
10.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1138247213.54% 73022
chr1 11297629 4.54% 6782
chr1_KI270713v1_random 1646 4.04% 4
chr2 9134221 3.77% 5854
chr3 7369214 3.72% 4722
chr4 4774396 2.51% 3171
chr5 5110412 2.82% 3466
chr6 6413438 3.75% 4272
chr7 5213639 3.27% 3517
chr8 4220699 2.91% 2908
chr9 5741172 4.15% 3663
chr10 6451349 4.82% 4028
chr11 6265997 4.64% 3758
chr11_KI270721v1_random 293 0.29% 1
chr12 6195059 4.65% 3727
chr13 2460571 2.15% 1694
chr14 3927433 3.67% 2398
chr15 4347238 4.26% 2823
chr16 3545596 3.92% 2456
chr17 5438701 6.53% 3292
chr17_GL000205v2_random 342 0.18% 1
chr18 2125286 2.64% 1405
chr19 4081158 6.96% 2523
chr20 3023455 4.69% 1990
chr21 1452979 3.11% 999
chr22 2476047 4.87% 1495
chrUn_GL000195v1 338 0.18% 1
chrUn_GL000219v1 1630 0.91% 1
chrUn_GL000220v1 216 0.13% 1
chrUn_KI270438v1 1237 1.10% 3
chrUn_KI270466v1 345 27.98% 1
chrUn_KI270467v1 1258 32.09% 2
chrX 2751727 1.76% 2064
3334 contigs with no values (185336294 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 73022 190 65275 1558.77 962
global segment-length histogram

Files

Filename Size md5
ENCFF531DLB.bed.gz 1.9 MB 47e9aaf96a4be041c6e68d3367f7c2bb
ENCFF531DLB.tabix.bed.gz 822.32 KB dfd1a17ce9d636c9b4fedfdd3fec62f6
ENCFF531DLB.tabix.bed.gz.tbi 227.82 KB 2997c770c4507585f45423aaf1e4a60f
genomic_resource.yaml 1.49 KB 7c55d990d0088b2a221da209f2288ddb
statistics/