Resource

Id Histone_ChIP-seq/ENCSR248PEScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR248PES [biosample_summary="Homo sapiens ascending aorta tissue female adult (53 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR248PES
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001496/
  • biosample_summary: Homo sapiens ascending aorta tissue female adult (53 years)
  • date_created: 2016-10-19T23:07:01.117357+00:00
  • date_released: 2016-11-04
  • doi: 10.17989/ENCSR248PES
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR248PES float

Histone_ChIP-seq_ENCSR248PES
Histone_ChIP-seq ENCSR248PES [biosample_summary="Homo sapiens ascending aorta tissue female adult (53 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR248PES [1.73, 14.5]
n
86,896,353
mean
4.73
sd
1.52

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 868963532.70% 171240
chr1 8549293 3.43% 16413
chr2 6533548 2.70% 13823
chr3 5366461 2.71% 11368
chr4 3345148 1.76% 7339
chr5 4022182 2.22% 8359
chr6 3690679 2.16% 8115
chr7 3900455 2.45% 8061
chr8 2780843 1.92% 6018
chr9 3860849 2.79% 7606
chr10 3783033 2.83% 7862
chr11 4767510 3.53% 8776
chr12 4911752 3.69% 9100
chr13 1699651 1.49% 3769
chr14 3003059 2.81% 6115
chr15 3316406 3.25% 6740
chr16 3946878 4.37% 7052
chr17 4989455 5.99% 9070
chr18 1279700 1.59% 3007
chr19 6322255 10.79% 9069
chr20 2595706 4.03% 4917
chr21 1040733 2.23% 1956
chr22 2269867 4.47% 4044
chrX 920791 0.59% 2660
chrY 99 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 171240 95 31369 507.45 315
global segment-length histogram

Files

Filename Size md5
ENCFF380AWN.bed.gz 3.23 MB 0e6aa8b95e7d979a593ac23b551d0dfe
ENCFF380AWN.tabix.bed.gz 1.62 MB c3a4209f89c2adc76eebd7a404219cbc
ENCFF380AWN.tabix.bed.gz.tbi 192.93 KB 92e6186411decc19583b074ffa669807
genomic_resource.yaml 1.52 KB 12643550b4deaaf41465871e3ab4cec8
statistics/