Resource

Id Histone_ChIP-seq/ENCSR246ARYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR246ARY [biosample_summary="Homo sapiens duodenal mucosa tissue male adult (76 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR246ARY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000320/
  • biosample_summary: Homo sapiens duodenal mucosa tissue male adult (76 years)
  • date_created: 2015-09-15T19:51:48.398507+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR246ARY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (76 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR246ARY float

Histone_ChIP-seq_ENCSR246ARY
Histone_ChIP-seq ENCSR246ARY [biosample_summary="Homo sapiens duodenal mucosa tissue male adult (76 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR246ARY [1.7, 32]
n
78,576,250
mean
5.99
sd
2.32

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 785762502.44% 101646
chr1 8512702 3.42% 10615
chr2 5938285 2.45% 7855
chr3 4577921 2.31% 6072
chr4 2649321 1.39% 3751
chr5 3906599 2.15% 5078
chr6 4287214 2.51% 5845
chr7 3336963 2.09% 4551
chr8 2940838 2.03% 3952
chr9 3555154 2.57% 4459
chr10 3803105 2.84% 4942
chr11 4782262 3.54% 5892
chr12 3741827 2.81% 4883
chr13 1518284 1.33% 2115
chr14 2801793 2.62% 3568
chr15 2806287 2.75% 3593
chr16 3393768 3.76% 4251
chr17 4835152 5.81% 5798
chr18 1432050 1.78% 1969
chr19 3215489 5.49% 4055
chr20 2478928 3.85% 3098
chr21 1024504 2.19% 1315
chr22 2228021 4.38% 2664
chrX 791568 0.51% 1293
chrY 18215 0.03% 32
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 101646 195 13065 773.04 613
global segment-length histogram

Files

Filename Size md5
ENCFF035IDT.bed.gz 2.05 MB 093ceb7b9496e704985bd75da5255cc9
ENCFF035IDT.tabix.bed.gz 1019.96 KB 07f6c529453c67562bf46047bdfded97
ENCFF035IDT.tabix.bed.gz.tbi 278.12 KB 91961b0ccb302b77e2268f8145e8e397
genomic_resource.yaml 2.0 KB 2ad51502956ffc5cf77d4ef99c49bef1
statistics/