Resource

Id Histone_ChIP-seq/ENCSR245VRRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR245VRR [biosample_summary="Homo sapiens tibial nerve tissue male adult (37 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR245VRR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001323/
  • biosample_summary: Homo sapiens tibial nerve tissue male adult (37 years)
  • date_created: 2019-04-27T22:53:22.333894+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR245VRR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR245VRR float

Histone_ChIP-seq_ENCSR245VRR
Histone_ChIP-seq ENCSR245VRR [biosample_summary="Homo sapiens tibial nerve tissue male adult (37 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR245VRR [1.19, 24.3]
n
223,325,300
mean
5.92
sd
2.56

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2233253006.94% 122449
chr1 21105965 8.48% 11417
chr2 17617030 7.27% 10566
chr3 14350112 7.24% 8526
chr4 9961753 5.24% 6210
chr5 11120100 6.13% 6664
chr6 10668940 6.25% 6524
chr7 10925539 6.86% 6527
chr8 8196656 5.65% 4977
chr9 10071842 7.28% 5557
chr10 9934860 7.43% 5673
chr11 10947726 8.10% 5508
chr12 11592079 8.70% 5978
chr13 5087559 4.45% 3265
chr14 7885457 7.37% 4372
chr15 8432141 8.27% 4726
chr16 9160235 10.14% 4045
chr17 11609643 13.94% 5572
chr18 3989703 4.96% 2638
chr19 13144290 22.42% 4359
chr20 6234634 9.67% 2998
chr21 2650654 5.67% 1379
chr22 5340731 10.51% 2361
chrX 3139324 2.01% 2474
chrY 158327 0.28% 133
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 122449 210 75254 1823.82 1004
global segment-length histogram

Files

Filename Size md5
ENCFF956HJA.bed.gz 2.68 MB 395c55885f25c135c364ed1add096d18
ENCFF956HJA.tabix.bed.gz 1.25 MB 7fbd53c1a2e2fd11cfbbd8bc94f1cdb9
ENCFF956HJA.tabix.bed.gz.tbi 178.08 KB a696015d7f68ac0f092fbd7b9b5614ee
genomic_resource.yaml 1.5 KB 61004083136a5b1ff178e3b63a244220
statistics/