Resource

Id Histone_ChIP-seq/ENCSR245GEVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR245GEV [biosample_summary="Homo sapiens pancreas tissue female adult (61 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR245GEV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001264/
  • biosample_summary: Homo sapiens pancreas tissue female adult (61 years)
  • date_created: 2020-05-01T02:24:53.716836+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR245GEV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (61 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR245GEV float

Histone_ChIP-seq_ENCSR245GEV
Histone_ChIP-seq ENCSR245GEV [biosample_summary="Homo sapiens pancreas tissue female adult (61 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR245GEV [1.82, 48.3]
n
38,835,853
mean
8.99
sd
6.02

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 388358531.21% 32848
chr1 4190292 1.68% 3484
chr2 2707206 1.12% 2326
chr3 2180501 1.10% 1854
chr4 1403845 0.74% 1188
chr5 1658748 0.91% 1456
chr6 2019279 1.18% 1699
chr7 1793973 1.13% 1533
chr8 1467981 1.01% 1277
chr9 1763085 1.27% 1506
chr10 1947689 1.46% 1648
chr11 2215200 1.64% 1819
chr12 1884857 1.41% 1542
chr13 798076 0.70% 673
chr14 1412792 1.32% 1177
chr15 1382118 1.36% 1169
chr16 1681442 1.86% 1431
chr17 2402713 2.89% 1931
chr18 677154 0.84% 603
chr19 2077926 3.54% 1792
chr20 1088924 1.69% 925
chr21 420786 0.90% 372
chr22 1065783 2.10% 833
chrX 595483 0.38% 610
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 32848 230 14495 1182.29 934
global segment-length histogram

Files

Filename Size md5
ENCFF714JDQ.bed.gz 764.1 KB 03712150022b7686c3438fcac653d13b
ENCFF714JDQ.tabix.bed.gz 355.41 KB 27dd4951e4f0ab693b3fff20db9d2d61
ENCFF714JDQ.tabix.bed.gz.tbi 162.51 KB a7884f9b978581ee64fb54f3fe4613ea
genomic_resource.yaml 1.71 KB 59e025723173b168ce877ef82e2c379b
statistics/