Resource

Id Histone_ChIP-seq/ENCSR245BEVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR245BEV [biosample_summary="Homo sapiens psoas muscle tissue male child (3 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR245BEV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008450/
  • biosample_summary: Homo sapiens psoas muscle tissue male child (3 years)
  • date_created: 2015-10-01T07:17:20.656721+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR245BEV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male child (3 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR245BEV float

Histone_ChIP-seq_ENCSR245BEV
Histone_ChIP-seq ENCSR245BEV [biosample_summary="Homo sapiens psoas muscle tissue male child (3 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR245BEV [1.66, 60.7]
n
36,838,676
mean
19.4
sd
9.67

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 368386761.15% 26480
chr1 3608344 1.45% 2554
chr2 2577796 1.06% 1793
chr3 2183456 1.10% 1558
chr4 1555675 0.82% 1114
chr5 1808863 1.00% 1251
chr6 2210749 1.29% 1601
chr7 1792583 1.12% 1348
chr8 1391576 0.96% 994
chr9 1515340 1.09% 1073
chr10 1600096 1.20% 1128
chr11 1971325 1.46% 1356
chr12 1938847 1.45% 1356
chr13 798147 0.70% 554
chr14 1231329 1.15% 838
chr15 1161719 1.14% 856
chr16 1351913 1.50% 978
chr17 2011239 2.42% 1466
chr18 653685 0.81% 434
chr19 2192503 3.74% 1776
chr20 928523 1.44% 670
chr21 370262 0.79% 267
chr22 763902 1.50% 555
chrM 9084 54.83% 8
chrX 1171365 0.75% 928
chrY 40355 0.07% 24
3341 contigs with no values (129060516 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 26480 185 10185 1391.19 1166
global segment-length histogram

Files

Filename Size md5
ENCFF287YZV.bed.gz 743.65 KB 48579439d55055d39fd14d44001aa7a9
ENCFF287YZV.tabix.bed.gz 310.34 KB 4cb31efb8d70c9ba9b41493942f095e8
ENCFF287YZV.tabix.bed.gz.tbi 155.03 KB 4bf32be2b379eb68256bd53b65b53ecf
genomic_resource.yaml 1.5 KB 99ae9ef80d6a16345437d04795ff8ddc
statistics/