Resource
| Id | Histone_ChIP-seq/ENCSR243UAI |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | Histone_ChIP-seq ENCSR243UAI [biosample_summary="Homo sapiens BLaER1 120 hours after the\ \ sample was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10\ \ ng/mL CSF1" and target="H4K20me1"] |
| Description |
status: released biological_replicates: Rep 1 summary: 120 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1 output_type: peaks audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-joint-replicate-peak-calling-step-v-1|/analysis-steps/crg-chip-seq-joint-replicate-peak-calling-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-alignment-and-filtering-step-v-1|/analysis-steps/crg-chip-seq-alignment-and-filtering-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-bed-to-bigbed-conversion-step-v-1|/analysis-steps/crg-chip-seq-bed-to-bigbed-conversion-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} audit_internal_action: Released analysis step version {crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0|/analysis-step-versions/crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR243UAI | float |
Histone_ChIP-seq_ENCSR243UAI |
Histone_ChIP-seq ENCSR243UAI [biosample_summary="Homo sapiens BLaER1 120 hours after the\ \ sample was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10\ \ ng/mL CSF1" and target="H4K20me1"]
|
 |
[1.2, 20.8] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 116571253 | 3.62% | 124500 |
| chr1 | 10468974 | 4.21% | 11659 |
| chr1_KI270709v1_random | 253 | 0.38% | 1 |
| chr2 | 8740092 | 3.61% | 9520 |
| chr3 | 7480566 | 3.77% | 8228 |
| chr3_GL000221v1_random | 251 | 0.16% | 1 |
| chr4 | 4747155 | 2.50% | 5645 |
| chr5 | 7194924 | 3.96% | 7489 |
| chr6 | 5412892 | 3.17% | 5776 |
| chr7 | 6397685 | 4.01% | 7117 |
| chr8 | 5775980 | 3.98% | 5405 |
| chr9 | 4897039 | 3.54% | 5396 |
| chr10 | 5846200 | 4.37% | 6315 |
| chr11 | 5676785 | 4.20% | 5624 |
| chr12 | 5558641 | 4.17% | 6096 |
| chr13 | 2294493 | 2.01% | 2669 |
| chr14 | 3761497 | 3.51% | 4219 |
| chr14_GL000194v1_random | 330 | 0.17% | 1 |
| chr15 | 4506808 | 4.42% | 4760 |
| chr16 | 5372923 | 5.95% | 5322 |
| chr17 | 6230416 | 7.48% | 6484 |
| chr18 | 1978459 | 2.46% | 2401 |
| chr19 | 4376754 | 7.47% | 3990 |
| chr20 | 3394617 | 5.27% | 3349 |
| chr21 | 1508794 | 3.23% | 1437 |
| chr22 | 2925028 | 5.76% | 2921 |
| chrUn_GL000195v1 | 282 | 0.15% | 1 |
| chrUn_GL000219v1 | 6359 | 3.55% | 10 |
| chrUn_KI270438v1 | 3143 | 2.79% | 4 |
| chrUn_KI270442v1 | 250 | 0.06% | 1 |
| chrX | 2013210 | 1.29% | 2658 |
| chrY | 453 | <0.01% | 1 |
| 3335 contigs with no values (127796699 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 124500 | 250 | 94469 | 936.32 | 444 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF766DKM.bed.gz | 2.33 MB | 7efaea6bb2d4e9385b0239e163ac69a2 |
| ENCFF766DKM.tabix.bed.gz | 1.17 MB | 901e1b142a6e42b6da8632d4486dd0e7 |
| ENCFF766DKM.tabix.bed.gz.tbi | 164.99 KB | fe75adbe3297532d3e41e29180f0535d |
| genomic_resource.yaml | 3.13 KB | c9edc7c2e4bf5a1465fdc5fe3d626a20 |
| statistics/ |