Resource

Id Histone_ChIP-seq/ENCSR241JLUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR241JLU [biosample_summary="Homo sapiens chorion tissue female embryo (40 weeks)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR241JLU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0003124/
  • biosample_summary: Homo sapiens chorion tissue female embryo (40 weeks)
  • date_created: 2017-03-22T16:16:43.765537+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR241JLU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (40 weeks)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR241JLU float

Histone_ChIP-seq_ENCSR241JLU
Histone_ChIP-seq ENCSR241JLU [biosample_summary="Homo sapiens chorion tissue female embryo (40 weeks)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR241JLU [1.66, 43.2]
n
5,301,716
mean
3.81
sd
1.15

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 53017160.16% 14203
chr1 479683 0.19% 1266
chr1_KI270709v1_random 1946 2.91% 1
chr2 294484 0.12% 837
chr3 146475 0.07% 426
chr4 205135 0.11% 532
chr5 260092 0.14% 698
chr6 168887 0.10% 474
chr7 278937 0.18% 702
chr8 234000 0.16% 606
chr9 245153 0.18% 603
chr9_KI270719v1_random 890 0.50% 1
chr10 314965 0.24% 792
chr11 228390 0.17% 621
chr12 204756 0.15% 558
chr13 118992 0.10% 322
chr14 164290 0.15% 424
chr14_GL000194v1_random 399 0.21% 1
chr14_GL000225v1_random 227 0.11% 1
chr15 131129 0.13% 370
chr16 204605 0.23% 496
chr17 252170 0.30% 685
chr17_GL000205v2_random 5765 3.11% 12
chr18 106347 0.13% 289
chr19 269248 0.46% 709
chr20 263366 0.41% 685
chr21 64408 0.14% 173
chr22 182478 0.36% 474
chr22_KI270732v1_random 873 2.10% 2
chr22_KI270733v1_random 988 0.55% 3
chr22_KI270738v1_random 304 0.31% 1
chrUn_GL000195v1 284 0.16% 1
chrUn_GL000214v1 214 0.16% 1
chrUn_GL000219v1 868 0.48% 1
chrUn_GL000220v1 199 0.12% 1
chrUn_GL000224v1 297 0.17% 1
chrUn_KI270442v1 275 0.07% 1
chrUn_KI270466v1 390 31.63% 1
chrUn_KI270467v1 756 19.29% 1
chrUn_KI270749v1 638 0.40% 2
chrUn_KI270751v1 185 0.12% 1
chrX 467886 0.30% 1427
chrY 342 <0.01% 1
3324 contigs with no values (126376435 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 14203 185 2512 373.28 318
global segment-length histogram

Files

Filename Size md5
ENCFF698LFL.bed.gz 269.16 KB 2079442337eead6a52ab2c3b136462ca
ENCFF698LFL.tabix.bed.gz 143.46 KB 2dc231bb07f886d4bf40cc5810a482ed
ENCFF698LFL.tabix.bed.gz.tbi 88.53 KB 61780384b7175a541a735fe15e35679b
genomic_resource.yaml 2.0 KB 7166a97aab579497296c724e5030e427
statistics/