Resource

Id Histone_ChIP-seq/ENCSR240ZWZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR240ZWZ [biosample_summary="Homo sapiens lung tissue female embryo (120 days)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR240ZWZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002048/
  • biosample_summary: Homo sapiens lung tissue female embryo (120 days)
  • date_created: 2015-09-15T19:52:10.835779+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR240ZWZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (120 days)
  • status: released
  • submitter_comment: As of June 22, 2017, this experiment's biosample (and donor) has been changed. A SNP-analysis shows that the original donor (ENCDO308YQF) was incorrect. 10/27/17: Control biosample.summary does not match Experiment (former control: ENCSR724XIL).
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR240ZWZ float

Histone_ChIP-seq_ENCSR240ZWZ
Histone_ChIP-seq ENCSR240ZWZ [biosample_summary="Homo sapiens lung tissue female embryo (120 days)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR240ZWZ [1.79, 22.7]
n
74,587,085
mean
5.38
sd
1.78

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 745870852.32% 146947
chr1 6962585 2.80% 13485
chr2 6244708 2.58% 12299
chr3 5035113 2.54% 10086
chr4 3398654 1.79% 7024
chr5 3946772 2.17% 7854
chr6 3439815 2.01% 6915
chr7 3255758 2.04% 6743
chr8 2655617 1.83% 5428
chr9 3333641 2.41% 6534
chr10 3414831 2.55% 6948
chr11 3806259 2.82% 7313
chr12 4110451 3.08% 7923
chr13 1699703 1.49% 3545
chr14 2743690 2.56% 5422
chr15 2846136 2.79% 5662
chr16 2915016 3.23% 5478
chr17 3999692 4.80% 7691
chr18 1467460 1.83% 2964
chr19 4059736 6.93% 7109
chr20 2131646 3.31% 4133
chr21 734297 1.57% 1432
chr22 1584189 3.12% 3016
chrX 801045 0.51% 1942
chrY 271 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 146947 155 10333 507.58 400
global segment-length histogram

Files

Filename Size md5
ENCFF212BPA.bed.gz 2.66 MB cb850aa00094761d6c86403185c44448
ENCFF212BPA.tabix.bed.gz 1.35 MB 8502983f21fe568852dca9204197fe8e
ENCFF212BPA.tabix.bed.gz.tbi 206.79 KB c19c81348f0e8a833d47272461b99361
genomic_resource.yaml 2.46 KB ce2ef110554ea5311cbc9e346b5b6d8f
statistics/