Resource

Id Histone_ChIP-seq/ENCSR238WIKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR238WIK [biosample_summary="Homo sapiens upper lobe of left lung tissue female adult (51 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR238WIK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008952/
  • biosample_summary: Homo sapiens upper lobe of left lung tissue female adult (51 years)
  • date_created: 2018-05-11T18:45:26.260319+00:00
  • date_released: 2018-12-11
  • doi: 10.17989/ENCSR238WIK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR238WIK float

Histone_ChIP-seq_ENCSR238WIK
Histone_ChIP-seq ENCSR238WIK [biosample_summary="Homo sapiens upper lobe of left lung tissue female adult (51 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR238WIK [1.66, 15.7]
n
134,705,376
mean
4.79
sd
1.69

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1347053764.19% 108352
chr1 13394517 5.38% 10570
chr1_KI270712v1_random 3809 2.16% 5
chr1_KI270713v1_random 1202 2.95% 2
chr1_KI270714v1_random 354 0.85% 1
chr2 10298771 4.25% 8541
chr3 8517364 4.30% 7051
chr4 4620879 2.43% 4157
chr5 6437380 3.55% 5423
chr6 7094860 4.15% 6163
chr7 6230015 3.91% 5307
chr8 5321635 3.67% 4522
chr9 6011773 4.34% 4667
chr10 6823172 5.10% 5495
chr11 7258306 5.37% 5630
chr12 6757662 5.07% 5436
chr13 2793964 2.44% 2541
chr14 4636973 4.33% 3647
chr15 4923846 4.83% 3853
chr16 5579094 6.18% 4188
chr17 8122368 9.76% 5776
chr17_GL000205v2_random 2746 1.48% 3
chr18 2359764 2.94% 2049
chr19 6548733 11.17% 4577
chr20 4256493 6.60% 3200
chr21 1484301 3.18% 1259
chr22 3737301 7.35% 2755
chrUn_GL000195v1 515 0.28% 1
chrUn_GL000219v1 6023 3.36% 8
chrX 1481556 0.95% 1525
3337 contigs with no values (185498310 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 108352 225 30562 1243.22 918
global segment-length histogram

Files

Filename Size md5
ENCFF233OUN.bed.gz 2.33 MB 90e6034a73e654fa9a47a7b1934a64a7
ENCFF233OUN.tabix.bed.gz 1.1 MB 70089af845576e9f5e2683523450c51e
ENCFF233OUN.tabix.bed.gz.tbi 282.58 KB 4c9bef659b19e4f454f94311084ca7ee
genomic_resource.yaml 1.55 KB 55c84c0d168f88330bbd900a079afa8b
statistics/