Resource

Id Histone_ChIP-seq/ENCSR237QNBcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR237QNB [biosample_summary="Homo sapiens with Cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR237QNB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with Cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-01-28T04:11:03.542153+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR237QNB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with Cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR237QNB float

Histone_ChIP-seq_ENCSR237QNB
Histone_ChIP-seq ENCSR237QNB [biosample_summary="Homo sapiens with Cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR237QNB [1.7, 11.4]
n
53,050,646
mean
4.24
sd
1.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 530506461.65% 51264
chr1 1991709 0.80% 1721
chr2 1962796 0.81% 1666
chr3 780972 0.39% 727
chr4 1080228 0.57% 830
chr5 1496088 0.82% 1181
chr6 1912116 1.12% 1404
chr7 1420854 0.89% 1051
chr8 1193181 0.82% 1085
chr9 872965 0.63% 702
chr10 1703680 1.27% 1484
chr11 1075992 0.80% 963
chr12 1381758 1.04% 1078
chr13 624631 0.55% 525
chr14 1293414 1.21% 1097
chr15 1063946 1.04% 1036
chr16 1129126 1.25% 1057
chr17 1673145 2.01% 1267
chr18 515720 0.64% 486
chr19 1073021 1.83% 949
chr20 996092 1.55% 909
chr21 415125 0.89% 415
chr22 425517 0.84% 438
chrX 26968570 17.28% 29193
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 51264 220 57143 1034.85 738
global segment-length histogram

Files

Filename Size md5
ENCFF121GIC.bed.gz 961.41 KB 724f93216589bafb089a7744afff3561
ENCFF121GIC.tabix.bed.gz 498.67 KB 45a1f741a78d832937a1217c75f097fa
ENCFF121GIC.tabix.bed.gz.tbi 124.01 KB 8b8d171ea90a9d17269f220e5f95759a
genomic_resource.yaml 1.75 KB 7f147e6a1a30fa416ec231b702e5bbb8
statistics/