Resource

Id Histone_ChIP-seq/ENCSR236KOXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR236KOX [biosample_summary="Homo sapiens heart right ventricle tissue male adult (40 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR236KOX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue male adult (40 years)
  • date_created: 2020-05-01T02:18:17.700298+00:00
  • date_released: 2020-09-15
  • doi: 10.17989/ENCSR236KOX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (40 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR236KOX float

Histone_ChIP-seq_ENCSR236KOX
Histone_ChIP-seq ENCSR236KOX [biosample_summary="Homo sapiens heart right ventricle tissue male adult (40 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR236KOX [1.93, 23.4]
n
23,263,491
mean
9
sd
3.52

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 232634910.72% 20131
chr1 2277317 0.91% 1970
chr2 1590978 0.66% 1344
chr3 1357028 0.68% 1085
chr4 962114 0.51% 778
chr5 1164843 0.64% 938
chr6 1367922 0.80% 1131
chr7 1121103 0.70% 992
chr8 871118 0.60% 734
chr9 962751 0.70% 855
chr10 1004866 0.75% 819
chr11 1263741 0.94% 1087
chr12 1235859 0.93% 1022
chr13 486368 0.43% 396
chr14 781334 0.73% 667
chr15 774175 0.76% 674
chr16 915704 1.01% 829
chr17 1346730 1.62% 1182
chr18 397627 0.49% 337
chr19 1429063 2.44% 1376
chr20 599134 0.93% 523
chr21 212484 0.45% 186
chr22 488720 0.96% 458
chrX 651711 0.42% 746
chrY 801 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 20131 245 8112 1155.61 1013
global segment-length histogram

Files

Filename Size md5
ENCFF539IOI.bed.gz 475.84 KB 54c4aeabe710bb20973f4b4cfa4b0aac
ENCFF539IOI.tabix.bed.gz 221.2 KB 83898006ad4fae7b795dfb50b02e3a72
ENCFF539IOI.tabix.bed.gz.tbi 128.09 KB 1321f425218f8f190a827734d3be56dd
genomic_resource.yaml 1.74 KB 3750523692f91dd272750eff603dc577
statistics/