Resource

Id Histone_ChIP-seq/ENCSR233RWFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR233RWF [biosample_summary="Homo sapiens with Cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR233RWF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with Cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-01-28T04:11:03.762526+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR233RWF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with Cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR233RWF float

Histone_ChIP-seq_ENCSR233RWF
Histone_ChIP-seq ENCSR233RWF [biosample_summary="Homo sapiens with Cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR233RWF [1.75, 40.6]
n
120,087,794
mean
10.3
sd
6.88

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1200877943.73% 72215
chr1 12313485 4.95% 7203
chr2 8801784 3.63% 5322
chr3 7143412 3.60% 4339
chr4 5523309 2.90% 3214
chr5 6260435 3.45% 3971
chr6 6531992 3.82% 3849
chr7 5774687 3.62% 3599
chr8 4417283 3.04% 2822
chr9 6372978 4.60% 3561
chr10 6313655 4.72% 3599
chr11 7199890 5.33% 4109
chr12 5744712 4.31% 3622
chr13 3042183 2.66% 1770
chr14 4118035 3.85% 2390
chr15 4303560 4.22% 2557
chr16 3922271 4.34% 2446
chr17 6425505 7.72% 3804
chr18 2432164 3.03% 1523
chr19 4453055 7.60% 2837
chr20 3292439 5.11% 2000
chr21 1333920 2.86% 830
chr22 2338107 4.60% 1466
chrX 2028933 1.30% 1382
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 72215 215 87075 1662.92 986
global segment-length histogram

Files

Filename Size md5
ENCFF970PFD.bed.gz 1.63 MB 6cd309abaa63c9fc4ce0e0143c1689ac
ENCFF970PFD.tabix.bed.gz 767.21 KB 6d51e33831925d568ef9677ad9af15d7
ENCFF970PFD.tabix.bed.gz.tbi 213.97 KB 1b1e71edb39ff9919d2df8e1285757df
genomic_resource.yaml 1.74 KB 223e1b1bf5ad69ff675d77d01c7d04ad
statistics/