Resource

Id Histone_ChIP-seq/ENCSR222QLWcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR222QLW [biosample_summary="Homo sapiens T-cell male adult (37 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR222QLW
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000084/
  • biosample_summary: Homo sapiens T-cell male adult (37 years)
  • date_created: 2015-09-16T21:41:58.929162+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR222QLW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR222QLW float

Histone_ChIP-seq_ENCSR222QLW
Histone_ChIP-seq ENCSR222QLW [biosample_summary="Homo sapiens T-cell male adult (37 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR222QLW [1.72, 111]
n
57,758,793
mean
19.3
sd
16.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 577587931.80% 42920
chr1 6002310 2.41% 4308
chr2 4654857 1.92% 3322
chr3 3439648 1.73% 2621
chr4 1844533 0.97% 1403
chr5 2888381 1.59% 2009
chr6 3627708 2.12% 2628
chr7 2489850 1.56% 1920
chr8 1918813 1.32% 1528
chr9 2059058 1.49% 1612
chr10 2662137 1.99% 1983
chr11 3018224 2.23% 2089
chr12 3086581 2.32% 2327
chr13 1264023 1.11% 897
chr14 2429927 2.27% 1624
chr15 1862468 1.83% 1315
chr16 2109360 2.33% 1768
chr17 3211479 3.86% 2464
chr18 893660 1.11% 664
chr19 2829874 4.83% 2294
chr20 1498838 2.33% 1160
chr21 636196 1.36% 532
chr22 1420468 2.80% 1040
chrX 1810248 1.16% 1330
chrY 100152 0.18% 82
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 42920 190 47584 1345.73 843
global segment-length histogram

Files

Filename Size md5
ENCFF653VLZ.bed.gz 1.05 MB 9025f4693f5fd391845fd1e6315b3c73
ENCFF653VLZ.tabix.bed.gz 472.5 KB dc3b41103abc17c73a1cc80f58c72386
ENCFF653VLZ.tabix.bed.gz.tbi 152.15 KB f6f87b95b70de91474e7181ea90563cb
genomic_resource.yaml 1.68 KB 0c3d54424283212886bdd3cb1c33cd13
statistics/