Resource

Id Histone_ChIP-seq/ENCSR218YUScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR218YUS [biosample_summary="Homo sapiens lower lobe of left lung tissue female adult (59 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR218YUS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008953/
  • biosample_summary: Homo sapiens lower lobe of left lung tissue female adult (59 years)
  • date_created: 2020-05-01T02:36:53.252134+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR218YUS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR218YUS float

Histone_ChIP-seq_ENCSR218YUS
Histone_ChIP-seq ENCSR218YUS [biosample_summary="Homo sapiens lower lobe of left lung tissue female adult (59 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR218YUS [1.66, 18.1]
n
62,556,773
mean
5.45
sd
2.53

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 625567731.94% 56817
chr1 5131342 2.06% 4415
chr2 3197349 1.32% 2467
chr3 1600030 0.81% 1287
chr4 1851017 0.97% 1269
chr5 2533713 1.40% 1829
chr6 2768593 1.62% 1951
chr7 2359917 1.48% 1698
chr8 2123048 1.46% 1718
chr9 2119162 1.53% 1675
chr10 2668149 1.99% 2159
chr11 2325724 1.72% 2031
chr12 2622790 1.97% 2173
chr13 1106161 0.97% 866
chr14 1499725 1.40% 1217
chr15 1442560 1.41% 1235
chr16 1702051 1.88% 1431
chr17 3193441 3.84% 2597
chr18 754811 0.94% 656
chr19 3195213 5.45% 2628
chr20 2691033 4.18% 2321
chr21 516475 1.11% 451
chr22 1702484 3.35% 1699
chrX 13451985 8.62% 17044
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 56817 190 57144 1101.02 693
global segment-length histogram

Files

Filename Size md5
ENCFF367LMT.bed.gz 1.05 MB 494545350e3927ceeb3199eb4574a422
ENCFF367LMT.tabix.bed.gz 553.94 KB 96a328a2ea8304ddb95848220c24ead2
ENCFF367LMT.tabix.bed.gz.tbi 146.24 KB daaec004d27273dc1c7325ef0e236bb9
genomic_resource.yaml 1.76 KB 266cea7feda810487d3fa31d4d2fadba
statistics/