Resource

Id Histone_ChIP-seq/ENCSR217CEYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR217CEY [biosample_summary="Homo sapiens stomach smooth muscle tissue male adult (59 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR217CEY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004222/
  • biosample_summary: Homo sapiens stomach smooth muscle tissue male adult (59 years)
  • date_created: 2015-09-15T19:52:33.977578+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR217CEY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR217CEY float

Histone_ChIP-seq_ENCSR217CEY
Histone_ChIP-seq ENCSR217CEY [biosample_summary="Homo sapiens stomach smooth muscle tissue male adult (59 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR217CEY [1.88, 18.9]
n
26,104,159
mean
5.9
sd
2.45

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 261041590.81% 37939
chr1 2944770 1.18% 4527
chr2 1676306 0.69% 2230
chr3 897749 0.45% 1269
chr4 830593 0.44% 1112
chr5 1291728 0.71% 1777
chr6 1514069 0.89% 2051
chr7 1301355 0.82% 1733
chr8 1102215 0.76% 1635
chr9 1124853 0.81% 1558
chr10 1261016 0.94% 1820
chr11 1341530 0.99% 2053
chr12 1301659 0.98% 1908
chr13 538125 0.47% 702
chr14 870778 0.81% 1262
chr15 669732 0.66% 996
chr16 1012653 1.12% 1562
chr17 1805964 2.17% 2546
chr18 442049 0.55% 702
chr19 1722023 2.94% 2516
chr20 1205279 1.87% 1873
chr21 315124 0.67% 515
chr22 738304 1.45% 1278
chrX 193857 0.12% 307
chrY 2428 <0.01% 7
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 37939 195 27244 688.06 442
global segment-length histogram

Files

Filename Size md5
ENCFF619DHC.bed.gz 686.21 KB 69086a9638b40e3f91f9a2ce69b89380
ENCFF619DHC.tabix.bed.gz 360.28 KB 4057d47ed65af81c409b079c1018b006
ENCFF619DHC.tabix.bed.gz.tbi 117.56 KB f837c83c6a8219f3dc2fae2ceb763bcb
genomic_resource.yaml 2.03 KB 910cc48f004f8fe56fa7043307ba93dd
statistics/