Resource

Id Histone_ChIP-seq/ENCSR213DKScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR213DKS [biosample_summary="Homo sapiens liver tissue female adult (25 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR213DKS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002107/
  • biosample_summary: Homo sapiens liver tissue female adult (25 years)
  • date_created: 2015-09-15T19:52:15.003278+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR213DKS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (25 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR213DKS float

Histone_ChIP-seq_ENCSR213DKS
Histone_ChIP-seq ENCSR213DKS [biosample_summary="Homo sapiens liver tissue female adult (25 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR213DKS [1.85, 19]
n
71,083,367
mean
6
sd
2.03

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 710833672.21% 118457
chr1 7323410 2.94% 11785
chr2 5872290 2.42% 9815
chr3 4800240 2.42% 8015
chr4 3014429 1.58% 5292
chr5 3749166 2.07% 6284
chr6 3487216 2.04% 5874
chr7 3091822 1.94% 5360
chr8 2537892 1.75% 4437
chr9 3236164 2.34% 5285
chr10 3282016 2.45% 5534
chr11 3718675 2.75% 5927
chr12 4289673 3.22% 7010
chr13 1576726 1.38% 2738
chr14 2583820 2.41% 4291
chr15 2734631 2.68% 4592
chr16 2760572 3.06% 4495
chr17 3475733 4.17% 5615
chr17_KI270729v1_random 179 0.06% 1
chr18 1233895 1.54% 2250
chr19 3094604 5.28% 4918
chr20 2006343 3.11% 3253
chr21 807625 1.73% 1379
chr22 1529786 3.01% 2524
chrX 876460 0.56% 1783
3342 contigs with no values (186023661 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 118457 155 11821 600.08 455
global segment-length histogram

Files

Filename Size md5
ENCFF660HZN.bed.gz 2.28 MB f06d38665f90868534f38b6f464754f7
ENCFF660HZN.tabix.bed.gz 1.12 MB 6581b3a9f20b03aaf047d45476a0edb3
ENCFF660HZN.tabix.bed.gz.tbi 174.77 KB e81d706bebd9a0138eb66a6520285e88
genomic_resource.yaml 1.99 KB a1d708f1db9be9d60a766e5a6e7fd13b
statistics/