Resource

Id Histone_ChIP-seq/ENCSR209WQNcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR209WQN [biosample_summary="Homo sapiens caudate nucleus tissue female adult (75 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR209WQN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001873/
  • biosample_summary: Homo sapiens caudate nucleus tissue female adult (75 years)
  • date_created: 2015-09-15T19:52:04.668312+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR209WQN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (75 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR209WQN float

Histone_ChIP-seq_ENCSR209WQN
Histone_ChIP-seq ENCSR209WQN [biosample_summary="Homo sapiens caudate nucleus tissue female adult (75 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR209WQN [1.9, 11.5]
n
6,711,219
mean
4.53
sd
1.24

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 67112190.21% 19328
chr1 463768 0.19% 1251
chr2 463734 0.19% 1205
chr3 207272 0.10% 604
chr4 287051 0.15% 714
chr5 351653 0.19% 884
chr6 524172 0.31% 1289
chr7 342323 0.21% 811
chr8 233449 0.16% 684
chr9 220495 0.16% 583
chr10 330885 0.25% 893
chr11 208944 0.15% 630
chr12 329070 0.25% 852
chr13 141365 0.12% 373
chr14 203487 0.19% 554
chr15 175802 0.17% 510
chr16 159492 0.18% 505
chr17 340439 0.41% 856
chr18 113123 0.14% 354
chr19 185885 0.32% 581
chr20 169827 0.26% 534
chr21 79564 0.17% 244
chr22 57824 0.11% 212
chrX 1121083 0.72% 4204
chrY 512 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 19328 155 4335 347.23 265
global segment-length histogram

Files

Filename Size md5
ENCFF591UDY.bed.gz 334.59 KB e0481fb5876f36e6e88bb6be6d727899
ENCFF591UDY.tabix.bed.gz 180.98 KB eeaeb33aec9d08b18eec3064e3415efa
ENCFF591UDY.tabix.bed.gz.tbi 97.11 KB 3083ebdc7370d034304abdac815d9c47
genomic_resource.yaml 2.02 KB 32363a70794e2715d94677e62b8522d5
statistics/