Resource

Id Histone_ChIP-seq/ENCSR206JRXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR206JRX [biosample_summary="Homo sapiens peripheral blood mononuclear cell female adult (28 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR206JRX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_2000001/
  • biosample_summary: Homo sapiens peripheral blood mononuclear cell female adult (28 years)
  • date_created: 2015-09-15T20:26:54.027757+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR206JRX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (28 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR206JRX float

Histone_ChIP-seq_ENCSR206JRX
Histone_ChIP-seq ENCSR206JRX [biosample_summary="Homo sapiens peripheral blood mononuclear cell female adult (28 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR206JRX [2.03, 49]
n
29,986,276
mean
19.2
sd
9.65

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 299862760.93% 23444
chr1 3041893 1.22% 2371
chr2 2084189 0.86% 1596
chr3 1607857 0.81% 1217
chr4 1071790 0.56% 795
chr5 1395053 0.77% 1027
chr6 1763007 1.03% 1316
chr7 1428898 0.90% 1183
chr8 1032582 0.71% 780
chr9 1184853 0.86% 973
chr10 1234849 0.92% 952
chr11 1661127 1.23% 1211
chr12 1596897 1.20% 1194
chr13 614983 0.54% 486
chr14 1052298 0.98% 836
chr15 942520 0.92% 733
chr16 1203823 1.33% 972
chr17 1883264 2.26% 1422
chr18 461429 0.57% 394
chr19 2035893 3.47% 1725
chr20 767517 1.19% 622
chr21 309285 0.66% 256
chr22 730307 1.44% 608
chrX 881962 0.57% 775
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 23444 210 12395 1279.06 1091
global segment-length histogram

Files

Filename Size md5
ENCFF687HCJ.bed.gz 594.73 KB 036bf2005402d0f9a315a90879776f58
ENCFF687HCJ.tabix.bed.gz 265.57 KB 7df07653491ac19e58c1de341e5efc6c
ENCFF687HCJ.tabix.bed.gz.tbi 141.88 KB feffac315cb7885399c652ae8a97ad11
genomic_resource.yaml 2.05 KB b4bc79f4fa186e4e8c38302a84439a5e
statistics/