Resource

Id Histone_ChIP-seq/ENCSR204OJScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR204OJS [biosample_summary="Homo sapiens stomach tissue male adult (54 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR204OJS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000945/
  • biosample_summary: Homo sapiens stomach tissue male adult (54 years)
  • date_created: 2017-12-06T21:01:32.245324+00:00
  • date_released: 2019-02-12
  • doi: 10.17989/ENCSR204OJS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR204OJS float

Histone_ChIP-seq_ENCSR204OJS
Histone_ChIP-seq ENCSR204OJS [biosample_summary="Homo sapiens stomach tissue male adult (54 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR204OJS [1.65, 56.2]
n
91,037,193
mean
12.2
sd
9.66

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 910371932.83% 57121
chr1 9531155 3.83% 5696
chr2 6695739 2.76% 4488
chr3 5376507 2.71% 3489
chr4 3297780 1.73% 2204
chr5 4264382 2.35% 2783
chr6 4578413 2.68% 3084
chr7 3982978 2.50% 2650
chr8 3493373 2.41% 2315
chr9 4333521 3.13% 2727
chr10 4415035 3.30% 2758
chr11 5157453 3.82% 3008
chr12 4473160 3.36% 2785
chr13 1820885 1.59% 1272
chr14 3196842 2.99% 1977
chr15 3163422 3.10% 1956
chr16 3727189 4.13% 2346
chr17 5605021 6.73% 3128
chr18 1527989 1.90% 1005
chr19 4514224 7.70% 2533
chr20 2685380 4.17% 1682
chr21 1148211 2.46% 748
chr22 2526908 4.97% 1429
chrX 1480210 0.95% 1028
chrY 41416 0.07% 30
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 57121 225 48801 1593.76 1109
global segment-length histogram

Files

Filename Size md5
ENCFF736SWI.bed.gz 1.39 MB d4b233381574b2e8ee266c9d9211f2ea
ENCFF736SWI.tabix.bed.gz 630.6 KB be9429bb81bdba8dc05b7a568056c6dc
ENCFF736SWI.tabix.bed.gz.tbi 208.31 KB 09cfc7fcdac2fab9bf121e349a7a8341
genomic_resource.yaml 1.7 KB 3d8e023980212b3f0947f5cc5bbc0042
statistics/