Resource

Id Histone_ChIP-seq/ENCSR203KEUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR203KEU [biosample_summary="Homo sapiens RWPE1" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR203KEU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002323/
  • biosample_summary: Homo sapiens RWPE1
  • date_created: 2017-02-23T19:40:18.669294+00:00
  • date_released: 2017-03-03
  • doi: 10.17989/ENCSR203KEU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR203KEU float

Histone_ChIP-seq_ENCSR203KEU
Histone_ChIP-seq ENCSR203KEU [biosample_summary="Homo sapiens RWPE1" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR203KEU [1.33, 655]
n
131,677,977
mean
43.9
sd
66.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1316779774.09% 95864
chr1 13331920 5.36% 9514
chr1_KI270712v1_random 1214 0.69% 2
chr1_KI270713v1_random 1933 4.74% 2
chr2 8223096 3.40% 6944
chr3 6510439 3.28% 5240
chr4 3290208 1.73% 3030
chr5 5167246 2.85% 4494
chr6 5562215 3.26% 4732
chr7 6564342 4.12% 5084
chr8 4297682 2.96% 3314
chr9 6579954 4.75% 4456
chr10 5653262 4.23% 4471
chr11 7184953 5.32% 4749
chr11_KI270721v1_random 503 0.50% 1
chr12 5714534 4.29% 4434
chr13 1771942 1.55% 1707
chr14 4279986 4.00% 3077
chr15 4260772 4.18% 3496
chr16 6854264 7.59% 4378
chr17 10397063 12.49% 6251
chr17_GL000205v2_random 2730 1.47% 4
chr18 1904691 2.37% 1787
chr19 10318802 17.60% 5242
chr20 4839154 7.51% 3487
chr21 1734248 3.71% 1354
chr22 5167130 10.17% 3046
chr22_KI270733v1_random 823 0.46% 1
chr22_KI270734v1_random 1015 0.61% 1
chrUn_GL000195v1 5950 3.25% 8
chrUn_GL000219v1 1540 0.86% 1
chrUn_GL000220v1 1110 0.69% 2
chrX 2029962 1.30% 1528
chrY 23294 0.04% 27
3333 contigs with no values (127705672 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 95864 305 54387 1373.59 805
global segment-length histogram

Files

Filename Size md5
ENCFF628MEK.bed.gz 2.59 MB 76401aff73c4bac5d7b5ff037844cf38
ENCFF628MEK.tabix.bed.gz 1.06 MB a95eae1c7e52734da11ba859147abdfd
ENCFF628MEK.tabix.bed.gz.tbi 234.17 KB 66ac90d3d1a1cca6acf685f0e0e53399
genomic_resource.yaml 1.36 KB 7848f719d449ae5884f0bfbf81b76292
statistics/