Resource

Id Histone_ChIP-seq/ENCSR200AFXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR200AFX [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue female adult (51 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR200AFX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004648/
  • biosample_summary: Homo sapiens esophagus muscularis mucosa tissue female adult (51 years)
  • date_created: 2018-10-31T03:07:12.566955+00:00
  • date_released: 2019-08-01
  • doi: 10.17989/ENCSR200AFX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR200AFX float

Histone_ChIP-seq_ENCSR200AFX
Histone_ChIP-seq ENCSR200AFX [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue female adult (51 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR200AFX [1.81, 8.13]
n
12,470,785
mean
4.08
sd
1.01

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 124707850.39% 12562
chr1 1113295 0.45% 1135
chr2 892502 0.37% 762
chr3 428581 0.22% 391
chr4 405250 0.21% 416
chr5 597699 0.33% 559
chr6 751742 0.44% 727
chr7 671940 0.42% 558
chr8 455213 0.31% 442
chr9 552557 0.40% 511
chr10 601449 0.45% 561
chr11 509256 0.38% 520
chr12 568568 0.43% 571
chr13 293807 0.26% 259
chr14 360993 0.34% 338
chr15 300507 0.29% 290
chr16 427234 0.47% 434
chr17 807668 0.97% 726
chr18 171663 0.21% 168
chr19 950455 1.62% 913
chr20 476034 0.74% 528
chr21 115099 0.25% 120
chr22 258407 0.51% 301
chrX 760866 0.49% 1332
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 12562 200 16206 992.74 682
global segment-length histogram

Files

Filename Size md5
ENCFF450WVA.bed.gz 248.07 KB 12c498daff4ac6e6a08a0f0d6e35a6d6
ENCFF450WVA.tabix.bed.gz 129.32 KB f5576bc8b7d81177c4c18f2f0483154e
ENCFF450WVA.tabix.bed.gz.tbi 63.07 KB 5693a2fe2972634b2c15345950c5fc10
genomic_resource.yaml 1.78 KB e94a652951556bf77df081a307775078
statistics/