Resource

Id Histone_ChIP-seq/ENCSR197KBAcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR197KBA [biosample_summary="Homo sapiens BLaER1 72 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR197KBA
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 72 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:51:11.055626+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR197KBA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 72 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR197KBA float

Histone_ChIP-seq_ENCSR197KBA
Histone_ChIP-seq ENCSR197KBA [biosample_summary="Homo sapiens BLaER1 72 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR197KBA [1.62, 43.4]
n
98,701,754
mean
8.32
sd
7.41

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 987017543.07% 56329
chr1 3620828 1.45% 1838
chr2 2879872 1.19% 1425
chr3 1580663 0.80% 815
chr4 1243944 0.65% 660
chr5 1805533 0.99% 853
chr6 1880362 1.10% 900
chr7 1752964 1.10% 861
chr8 1932668 1.33% 987
chr9 1617754 1.17% 874
chr10 1895425 1.42% 915
chr11 2079009 1.54% 986
chr12 1851154 1.39% 821
chr13 819635 0.72% 369
chr14 1047819 0.98% 519
chr15 1357180 1.33% 617
chr16 1560070 1.73% 744
chr17 2427290 2.92% 1090
chr18 551937 0.69% 309
chr19 1610639 2.75% 820
chr20 1233527 1.91% 594
chr21 413215 0.88% 212
chr22 1030678 2.03% 558
chrX 62509588 40.06% 38562
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 56329 203 132531 1752.24 977
global segment-length histogram

Files

Filename Size md5
ENCFF043JKI.bed.gz 1.24 MB 1aef1adf6774ea62b74d5ddb8af57457
ENCFF043JKI.tabix.bed.gz 584.07 KB 60c26c7e841a1b3cb696fed081a3d448
ENCFF043JKI.tabix.bed.gz.tbi 95.13 KB bbc0cb298eb34a0f79024e5957aac40a
genomic_resource.yaml 2.32 KB 840d7b7f074e6fa9acf2d51490e07e0f
statistics/