Resource

Id Histone_ChIP-seq/ENCSR195JWZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR195JWZ [biosample_summary="Homo sapiens gastroesophageal sphincter tissue male adult (54 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR195JWZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004550/
  • biosample_summary: Homo sapiens gastroesophageal sphincter tissue male adult (54 years)
  • date_created: 2017-12-06T21:10:25.230980+00:00
  • date_released: 2019-02-12
  • doi: 10.17989/ENCSR195JWZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR195JWZ float

Histone_ChIP-seq_ENCSR195JWZ
Histone_ChIP-seq ENCSR195JWZ [biosample_summary="Homo sapiens gastroesophageal sphincter tissue male adult (54 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR195JWZ [1.53, 28.2]
n
47,090,183
mean
6.18
sd
3.24

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 470901831.46% 41994
chr1 4990815 2.00% 4280
chr1_KI270713v1_random 646 1.59% 1
chr2 3705443 1.53% 3308
chr3 3532053 1.78% 3070
chr4 2296797 1.21% 2077
chr5 2219838 1.22% 1995
chr6 2466581 1.44% 2247
chr7 2099528 1.32% 1982
chr8 1717634 1.18% 1531
chr9 2240082 1.62% 1848
chr10 2628438 1.96% 2245
chr11 2458719 1.82% 2094
chr12 2567616 1.93% 2285
chr13 1064833 0.93% 1012
chr14 1722515 1.61% 1455
chr15 1657432 1.63% 1495
chr16 1421070 1.57% 1366
chr17 2234591 2.68% 1996
chr18 685639 0.85% 690
chr19 1762907 3.01% 1682
chr20 1153858 1.79% 1040
chr21 411428 0.88% 402
chr22 951366 1.87% 843
chrUn_GL000195v1 2549 1.39% 5
chrUn_GL000219v1 1143 0.64% 1
chrUn_KI270442v1 225 0.06% 1
chrUn_KI270746v1 710 1.07% 1
chrX 1069397 0.69% 1019
chrY 26330 0.05% 23
3337 contigs with no values (128215699 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 41994 225 55987 1121.36 709
global segment-length histogram

Files

Filename Size md5
ENCFF977VRL.bed.gz 1.04 MB a0ce0ee76966867a2ca1c5b5d291b370
ENCFF977VRL.tabix.bed.gz 463.74 KB e7542e20a1fb3087ed945e796a9d389a
ENCFF977VRL.tabix.bed.gz.tbi 166.14 KB 1bd8bfa3b58e04ce5b4be1362a140e8f
genomic_resource.yaml 1.55 KB 02753433469062d85812c1cd72f7a14b
statistics/