Resource

Id Histone_ChIP-seq/ENCSR194KGOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR194KGO [biosample_summary="Homo sapiens skin epidermis tissue female adult (66 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR194KGO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001003/
  • biosample_summary: Homo sapiens skin epidermis tissue female adult (66 years)
  • date_created: 2020-07-02T16:54:42.934280+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR194KGO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (66 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR194KGO float

Histone_ChIP-seq_ENCSR194KGO
Histone_ChIP-seq ENCSR194KGO [biosample_summary="Homo sapiens skin epidermis tissue female adult (66 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR194KGO [1.8, 55.2]
n
51,959,419
mean
9.01
sd
6.38

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 519594191.61% 45230
chr1 5659508 2.27% 4697
chr2 3719993 1.54% 3355
chr3 3060037 1.54% 2741
chr4 1567791 0.82% 1516
chr5 2224457 1.23% 2009
chr6 2824995 1.65% 2500
chr7 2092371 1.31% 1899
chr8 1853688 1.28% 1764
chr9 2390154 1.73% 2069
chr10 2468203 1.84% 2176
chr11 2991513 2.21% 2509
chr12 2809669 2.11% 2336
chr13 929367 0.81% 888
chr14 1949837 1.82% 1632
chr15 1763708 1.73% 1574
chr16 2024211 2.24% 1779
chr17 3315311 3.98% 2682
chr18 867387 1.08% 825
chr19 3102662 5.29% 2444
chr20 1475204 2.29% 1298
chr21 620123 1.33% 579
chr22 1456049 2.87% 1208
chrX 793181 0.51% 750
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 45230 230 19854 1148.78 832
global segment-length histogram

Files

Filename Size md5
ENCFF346GZD.bed.gz 1.01 MB c219079b5bdc9c04974956e347ad2381
ENCFF346GZD.tabix.bed.gz 484.52 KB a07b096d54bd801ea9f94f5616b8f421
ENCFF346GZD.tabix.bed.gz.tbi 186.44 KB 447bf1e7a94d54835a59f4fd512854cb
genomic_resource.yaml 1.73 KB 60ab8ab1c95de12127b843c593938115
statistics/