Resource

Id Histone_ChIP-seq/ENCSR188HXKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR188HXK [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue male adult (37 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR188HXK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004648/
  • biosample_summary: Homo sapiens esophagus muscularis mucosa tissue male adult (37 years)
  • date_created: 2019-07-29T21:27:58.393898+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR188HXK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR188HXK float

Histone_ChIP-seq_ENCSR188HXK
Histone_ChIP-seq ENCSR188HXK [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue male adult (37 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR188HXK [1.59, 24.5]
n
99,276,597
mean
6.5
sd
3.91

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 992765973.09% 78863
chr1 11297496 4.54% 8485
chr2 5977779 2.47% 5202
chr3 2927678 1.48% 2531
chr4 2663921 1.40% 2009
chr5 4529642 2.50% 3684
chr6 4418732 2.59% 3527
chr7 4584323 2.88% 3661
chr8 4186073 2.88% 3398
chr9 3955791 2.86% 2791
chr10 5040168 3.77% 4230
chr11 5353531 3.96% 4482
chr12 5161132 3.87% 4220
chr13 1903457 1.66% 1628
chr14 3110409 2.91% 2671
chr15 2907747 2.85% 2638
chr16 4502807 4.98% 3702
chr17 6478942 7.78% 4714
chr18 1624765 2.02% 1565
chr19 7226713 12.33% 4954
chr20 4917544 7.63% 3721
chr21 1519656 3.25% 1294
chr22 4290564 8.44% 3207
chrX 682721 0.44% 533
chrY 15006 0.03% 16
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 78863 200 91661 1258.85 775
global segment-length histogram

Files

Filename Size md5
ENCFF642GVX.bed.gz 1.46 MB 5a3fe3062203fc9031c3f4f6592f93b9
ENCFF642GVX.tabix.bed.gz 762.85 KB 5cdd6655db0cf2cf1cfb8c870a0415f9
ENCFF642GVX.tabix.bed.gz.tbi 175.89 KB f874a1fa1674e0b795ea7af5368dde40
genomic_resource.yaml 1.77 KB 5a99035b78487152ee35a2c717e17b4d
statistics/