Resource

Id Histone_ChIP-seq/ENCSR186EADcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR186EAD [biosample_summary="Homo sapiens Loucy" and target="H3K9me2"]
Description
Labels
  • accession: ENCSR186EAD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0007112/
  • biosample_summary: Homo sapiens Loucy
  • date_created: 2014-02-20T05:43:07.503078+00:00
  • date_released: 2016-11-04
  • doi: 10.17989/ENCSR186EAD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K9me2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR186EAD float

Histone_ChIP-seq_ENCSR186EAD
Histone_ChIP-seq ENCSR186EAD [biosample_summary="Homo sapiens Loucy" and target="H3K9me2"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR186EAD [1.66, 3.95]
n
818,236
mean
2.75
sd
0.326

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 8182360.03% 2038
chr1 61593 0.02% 158
chr2 81387 0.03% 204
chr3 72683 0.04% 177
chr4 93332 0.05% 230
chr5 37390 0.02% 96
chr6 59798 0.04% 151
chr7 45645 0.03% 117
chr8 51394 0.04% 129
chr9 30985 0.02% 79
chr10 36162 0.03% 91
chr11 44422 0.03% 103
chr12 43468 0.03% 104
chr13 38475 0.03% 100
chr14 31535 0.03% 75
chr15 19022 0.02% 47
chr16 9780 0.01% 26
chr17 11001 0.01% 28
chr18 26503 0.03% 69
chr19 3972 0.01% 7
chr20 11151 0.02% 28
chr21 8173 0.02% 18
chr22 365 <0.01% 1
3344 contigs with no values (342345395 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 2038 215 1157 401.49 375.5
global segment-length histogram

Files

Filename Size md5
ENCFF923RYV.bed.gz 38.25 KB 97d5f69c35095996eb9d5a60295c1837
ENCFF923RYV.tabix.bed.gz 20.86 KB 2f6b9feea079cc0028acc5f7821c668f
ENCFF923RYV.tabix.bed.gz.tbi 25.39 KB f51aed8d85a03bbd8bed3edbf283600a
genomic_resource.yaml 2.08 KB 60b9d2483c8b9e12cab8e3d61b5e8ed1
statistics/