Resource

Id Histone_ChIP-seq/ENCSR181OHFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR181OHF [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR181OHF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with Alzheimer's disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-08-25T18:06:47.815205+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR181OHF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with Alzheimer's disease
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR181OHF float

Histone_ChIP-seq_ENCSR181OHF
Histone_ChIP-seq ENCSR181OHF [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR181OHF [1.9, 39.2]
n
60,419,388
mean
8.46
sd
5.17

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 604193881.88% 53599
chr1 6246211 2.51% 5332
chr2 4361674 1.80% 3848
chr3 3508597 1.77% 3198
chr4 2459065 1.29% 2172
chr5 3092892 1.70% 2728
chr6 3151486 1.85% 2673
chr7 2639238 1.66% 2482
chr8 2287480 1.58% 2139
chr9 3008189 2.17% 2549
chr10 3228085 2.41% 2703
chr11 3677336 2.72% 3168
chr12 2969708 2.23% 2762
chr13 1427861 1.25% 1279
chr14 2121654 1.98% 1798
chr15 2080752 2.04% 1848
chr16 2120334 2.35% 1936
chr17 3461933 4.16% 3076
chr18 1148258 1.43% 1047
chr19 2695958 4.60% 2523
chr20 1708608 2.65% 1497
chr21 670355 1.44% 588
chr22 1436921 2.83% 1287
chrX 916793 0.59% 966
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 53599 200 31530 1127.25 729
global segment-length histogram

Files

Filename Size md5
ENCFF307QYO.bed.gz 1.12 MB cab136158a5d1be37becb1d7ef3c7171
ENCFF307QYO.tabix.bed.gz 553.03 KB 54fb189dd7a4b9a1116c473aee1c1375
ENCFF307QYO.tabix.bed.gz.tbi 200.04 KB 2e64567fccc38f8711f68cdb5c6bbe57
genomic_resource.yaml 1.75 KB c253de16102647aece74cc052a0355ea
statistics/