Resource

Id Histone_ChIP-seq/ENCSR181DTXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR181DTX [biosample_summary="Homo sapiens placenta tissue female embryo" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR181DTX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001987/
  • biosample_summary: Homo sapiens placenta tissue female embryo
  • date_created: 2022-05-11T01:54:31.438792+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR181DTX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR181DTX float

Histone_ChIP-seq_ENCSR181DTX
Histone_ChIP-seq ENCSR181DTX [biosample_summary="Homo sapiens placenta tissue female embryo" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR181DTX [1.73, 6.82]
n
17,468,041
mean
3.42
sd
0.687

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 174680410.54% 25105
chr1 1971386 0.79% 2742
chr2 1214686 0.50% 1788
chr3 1036738 0.52% 1493
chr4 564632 0.30% 922
chr5 982937 0.54% 1486
chr6 691419 0.40% 1037
chr7 763046 0.48% 1115
chr8 435136 0.30% 684
chr9 805749 0.58% 1109
chr10 803954 0.60% 1194
chr11 1065213 0.79% 1436
chr12 1057827 0.79% 1480
chr13 293023 0.26% 484
chr14 723028 0.68% 1028
chr15 668600 0.66% 1024
chr16 817475 0.90% 1083
chr17 1230853 1.48% 1668
chr18 220708 0.27% 365
chr19 746305 1.27% 1031
chr20 559126 0.87% 780
chr21 190757 0.41% 292
chr22 472650 0.93% 619
chrX 152793 0.10% 245
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 25105 195 7754 695.8 564
global segment-length histogram

Files

Filename Size md5
ENCFF332MNI.bed.gz 482.58 KB bf8b22aebbf857b0003f34dd1ba8763b
ENCFF332MNI.tabix.bed.gz 251.92 KB de1d9c7e117e4af121e884a55a0033e0
ENCFF332MNI.tabix.bed.gz.tbi 83.5 KB f816428fb6ff652ecd0a545e2456c692
genomic_resource.yaml 1.45 KB d98984de886cb532439ee6bf09f99558
statistics/