Resource

Id Histone_ChIP-seq/ENCSR177CGNcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR177CGN [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue female adult (53 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR177CGN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004648/
  • biosample_summary: Homo sapiens esophagus muscularis mucosa tissue female adult (53 years)
  • date_created: 2016-10-22T16:07:17.773745+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR177CGN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR177CGN float

Histone_ChIP-seq_ENCSR177CGN
Histone_ChIP-seq ENCSR177CGN [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue female adult (53 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR177CGN [1.24, 13.2]
n
1,164,781
mean
3.27
sd
0.644

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 11647810.04% 2094
chr1 108452 0.04% 194
chr2 102021 0.04% 169
chr3 51182 0.03% 97
chr4 32906 0.02% 66
chr5 47961 0.03% 86
chr6 59216 0.03% 107
chr7 76638 0.05% 126
chr8 37693 0.03% 64
chr9 60028 0.04% 107
chr10 55208 0.04% 95
chr11 54904 0.04% 96
chr12 51066 0.04% 100
chr13 25132 0.02% 45
chr14 44174 0.04% 79
chr15 32869 0.03% 62
chr16 42162 0.05% 77
chr17 106403 0.13% 178
chr18 5288 0.01% 13
chr19 94420 0.16% 173
chr20 22904 0.04% 49
chr21 13035 0.03% 26
chr22 21687 0.04% 37
chrX 19432 0.01% 48
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 2094 215 2262 556.25 473
global segment-length histogram

Files

Filename Size md5
ENCFF499QZD.bed.gz 38.28 KB 0cc25fae5677e0f45d7df9532d835ea7
ENCFF499QZD.tabix.bed.gz 21.12 KB b98ef2abd8a9d02d4c3699ef24e207bc
ENCFF499QZD.tabix.bed.gz.tbi 21.4 KB babf4bab48c8b6ababa4c112c31dbfd8
genomic_resource.yaml 1.56 KB b87e84f5b0eb4c9499a2739c4b92953b
statistics/