Resource

Id Histone_ChIP-seq/ENCSR175XPYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR175XPY [biosample_summary="Homo sapiens colonic mucosa tissue female adult (56 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR175XPY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000317/
  • biosample_summary: Homo sapiens colonic mucosa tissue female adult (56 years)
  • date_created: 2015-09-15T19:51:44.009910+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR175XPY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (56 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR175XPY float

Histone_ChIP-seq_ENCSR175XPY
Histone_ChIP-seq ENCSR175XPY [biosample_summary="Homo sapiens colonic mucosa tissue female adult (56 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR175XPY [2.08, 71.9]
n
52,363,959
mean
15
sd
10.9

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 523639591.63% 62754
chr1 5522250 2.22% 6415
chr1_KI270713v1_random 543 1.33% 2
chr2 3748574 1.55% 4646
chr3 2868656 1.45% 3633
chr4 1866351 0.98% 2343
chr5 2463898 1.36% 2921
chr6 2757382 1.61% 3353
chr7 2288675 1.44% 2771
chr8 1803901 1.24% 2305
chr9 2426959 1.75% 2910
chr10 2443652 1.83% 3053
chr11 3016260 2.23% 3434
chr12 2688287 2.02% 3139
chr13 1013367 0.89% 1227
chr14 1911875 1.79% 2284
chr15 1802166 1.77% 2151
chr16 2196817 2.43% 2652
chr17 3418008 4.11% 3763
chr17_GL000205v2_random 580 0.31% 1
chr18 864290 1.08% 1089
chr19 2838969 4.84% 3110
chr20 1494226 2.32% 1856
chr21 625499 1.34% 786
chr22 1431932 2.82% 1663
chrUn_GL000219v1 850 0.47% 2
chrX 869992 0.56% 1245
3340 contigs with no values (185898966 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 62754 180 13278 834.43 539
global segment-length histogram

Files

Filename Size md5
ENCFF523FZB.bed.gz 1.32 MB f440c237d6d5cb1f73c19e70aa6b6538
ENCFF523FZB.tabix.bed.gz 642.32 KB 1aece6e8611e9b0ab8878c3289ec2dc6
ENCFF523FZB.tabix.bed.gz.tbi 200.57 KB 68b37240f446ff6587f8672b7d7db425
genomic_resource.yaml 2.0 KB e16ed81e54cddd40b10b74387fed0cbf
statistics/