Resource

Id Histone_ChIP-seq/ENCSR168WTYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR168WTY [biosample_summary="Homo sapiens muscle layer of duodenum tissue male adult (73 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR168WTY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0012488/
  • biosample_summary: Homo sapiens muscle layer of duodenum tissue male adult (73 years)
  • date_created: 2015-09-15T19:52:37.835356+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR168WTY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (73 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR168WTY float

Histone_ChIP-seq_ENCSR168WTY
Histone_ChIP-seq ENCSR168WTY [biosample_summary="Homo sapiens muscle layer of duodenum tissue male adult (73 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR168WTY [2.03, 24.9]
n
42,525,352
mean
6.12
sd
2.42

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 425253521.32% 69361
chr1 2622916 1.05% 4542
chr1_KI270708v1_random 540 0.42% 1
chr1_KI270709v1_random 5150 7.70% 7
chr1_KI270712v1_random 545 0.31% 1
chr2 2953201 1.22% 5205
chr2_KI270716v1_random 1484 0.96% 3
chr3 2351943 1.19% 4261
chr4 2486111 1.31% 4408
chr4_GL000008v2_random 4429 2.11% 1
chr5 3047004 1.68% 4889
chr5_GL000208v1_random 276 0.30% 1
chr6 2001640 1.17% 3631
chr7 2703921 1.70% 4406
chr8 2195597 1.51% 3709
chr9 1449783 1.05% 2376
chr9_KI270719v1_random 1248 0.71% 4
chr10 2192346 1.64% 3496
chr11 1898128 1.41% 3129
chr12 2210150 1.66% 3466
chr13 1105755 0.97% 2033
chr14 1196214 1.12% 2093
chr14_GL000194v1_random 677 0.35% 1
chr14_GL000225v1_random 22197 10.51% 32
chr14_KI270722v1_random 6030 3.11% 10
chr14_KI270723v1_random 288 0.76% 1
chr15 1083078 1.06% 1730
chr16 1427289 1.58% 2249
chr16_KI270728v1_random 368 0.02% 1
chr17 870478 1.05% 1414
chr17_GL000205v2_random 13441 7.24% 18
chr17_KI270729v1_random 60266 21.46% 65
chr17_KI270730v1_random 18212 16.18% 18
chr18 902035 1.12% 1623
chr19 4044461 6.90% 4498
chr20 888701 1.38% 1414
chr21 612491 1.31% 895
chr22 462902 0.91% 744
chr22_KI270732v1_random 2223 5.35% 5
chr22_KI270733v1_random 595 0.33% 2
chr22_KI270735v1_random 3492 8.16% 6
chr22_KI270736v1_random 106108 58.33% 78
chr22_KI270738v1_random 8136 8.19% 15
chrUn_GL000214v1 266 0.19% 1
chrUn_GL000216v2 58990 33.40% 39
chrUn_GL000219v1 6286 3.51% 5
chrUn_GL000224v1 11745 6.54% 15
chrUn_KI270429v1 463 34.02% 1
chrUn_KI270435v1 2017 2.17% 5
chrUn_KI270438v1 30900 27.47% 32
chrUn_KI270442v1 85520 21.81% 71
chrUn_KI270465v1 395 22.27% 1
chrUn_KI270508v1 388 19.89% 1
chrUn_KI270511v1 527 6.48% 1
chrUn_KI270512v1 1599 7.05% 1
chrUn_KI270519v1 5120 3.71% 8
chrUn_KI270522v1 314 5.53% 1
chrUn_KI270538v1 843 0.92% 3
chrUn_KI270587v1 381 12.83% 1
chrUn_KI270589v1 3041 6.84% 1
chrUn_KI270591v1 928 16.01% 1
chrUn_KI270742v1 377 0.20% 1
chrUn_KI270743v1 570 0.27% 2
chrUn_KI270744v1 3206 1.90% 6
chrUn_KI270746v1 444 0.67% 1
chrUn_KI270747v1 1052 0.53% 2
chrUn_KI270749v1 376 0.24% 1
chrUn_KI270750v1 487 0.33% 1
chrUn_KI270751v1 1118 0.74% 1
chrUn_KI270754v1 485 1.21% 1
chrUn_KI270756v1 4829 6.07% 7
chrUn_KI270757v1 5344 7.50% 5
chrX 1016365 0.65% 2202
chrY 319127 0.56% 462
3293 contigs with no values (121366001 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 69361 205 36189 613.1 483
global segment-length histogram

Files

Filename Size md5
ENCFF468WCE.bed.gz 1.25 MB d97e498f4b762e085ae6aa32e99e46d9
ENCFF468WCE.tabix.bed.gz 662.32 KB 890601beb45ae590480b1df10e6062c0
ENCFF468WCE.tabix.bed.gz.tbi 290.89 KB b83dc2a668a122b3a01506e034f571ed
genomic_resource.yaml 2.04 KB 3160453a3a6f8a77ce558fa4cb868c7f
statistics/