Resource

Id Histone_ChIP-seq/ENCSR161NONcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR161NON [biosample_summary="Homo sapiens H1" and target="H2BK5ac"]
Description
Labels
  • accession: ENCSR161NON
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003042/
  • biosample_summary: Homo sapiens H1
  • date_created: 2015-10-01T07:15:55.045133+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR161NON
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H2BK5ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR161NON float

Histone_ChIP-seq_ENCSR161NON
Histone_ChIP-seq ENCSR161NON [biosample_summary="Homo sapiens H1" and target="H2BK5ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR161NON [1.7, 65.4]
n
48,132,874
mean
5.84
sd
3.02

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 481328741.50% 79184
chr1 4929666 1.98% 7828
chr2 3275623 1.35% 5514
chr3 2684516 1.35% 4604
chr4 1782549 0.94% 3132
chr5 2331805 1.28% 3892
chr6 2697634 1.58% 4475
chr7 2505519 1.57% 4227
chr8 1940306 1.34% 3325
chr9 2152409 1.56% 3523
chr10 2260622 1.69% 3725
chr11 2636286 1.95% 4237
chr12 2478965 1.86% 3983
chr13 1062369 0.93% 1908
chr14 1566666 1.46% 2569
chr15 1544762 1.51% 2570
chr16 2019855 2.24% 3277
chr17 2629732 3.16% 4129
chr18 921079 1.15% 1632
chr19 2380071 4.06% 3661
chr20 1474238 2.29% 2407
chr21 604953 1.30% 1003
chr22 1418860 2.79% 2222
chrX 783775 0.50% 1269
chrY 50614 0.09% 72
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 79184 195 11415 607.86 489
global segment-length histogram

Files

Filename Size md5
ENCFF929FTR.bed.gz 1.68 MB da0844aee2484eeb7274aa1dbde84284
ENCFF929FTR.tabix.bed.gz 808.13 KB 61d3890d913c207bee053085b8308dbe
ENCFF929FTR.tabix.bed.gz.tbi 277.59 KB 7441f05c87a266954d83adf9da96d3a3
genomic_resource.yaml 2.08 KB d3cb4ae01cc7425a02044203c0f1f0fe
statistics/