Resource

Id Histone_ChIP-seq/ENCSR161FEJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR161FEJ [biosample_summary="Homo sapiens spleen tissue female adult (53 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR161FEJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue female adult (53 years)
  • date_created: 2016-10-19T23:16:29.472054+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR161FEJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR161FEJ float

Histone_ChIP-seq_ENCSR161FEJ
Histone_ChIP-seq ENCSR161FEJ [biosample_summary="Homo sapiens spleen tissue female adult (53 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR161FEJ [1.52, 16.7]
n
61,407,923
mean
5.17
sd
2.84

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 614079231.91% 44119
chr1 6066812 2.44% 4373
chr2 4071302 1.68% 2779
chr3 2284108 1.15% 1615
chr4 2155313 1.13% 1377
chr5 3090064 1.70% 2033
chr6 3414420 2.00% 2258
chr7 2707125 1.70% 1713
chr8 2416791 1.67% 1693
chr9 2668341 1.93% 1861
chr10 3020655 2.26% 2151
chr11 3118500 2.31% 2271
chr12 2800541 2.10% 1977
chr13 1258435 1.10% 868
chr14 1709729 1.60% 1131
chr15 2061268 2.02% 1560
chr16 2008947 2.22% 1420
chr17 3673712 4.41% 2391
chr18 987392 1.23% 737
chr19 3326091 5.67% 2100
chr20 2501721 3.88% 1788
chr21 584977 1.25% 443
chr22 1542084 3.03% 1135
chrX 3939595 2.52% 4445
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 44119 223 80394 1391.87 808
global segment-length histogram

Files

Filename Size md5
ENCFF386PSY.bed.gz 903.3 KB 3d7c4142600efe4abc2fa82d359d2dae
ENCFF386PSY.tabix.bed.gz 450.33 KB b2eb29aaaf0c4316bddada520439af7c
ENCFF386PSY.tabix.bed.gz.tbi 158.87 KB 0bef60c0cbcbbb33e0e8cb6539eaa5f3
genomic_resource.yaml 1.71 KB d3b75fbc0272b065a64ca87111b6c758
statistics/