Resource

Id Histone_ChIP-seq/ENCSR160CPScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR160CPS [biosample_summary="Homo sapiens myoepithelial cell of mammary gland female adult (36 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR160CPS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0002324/
  • biosample_summary: Homo sapiens myoepithelial cell of mammary gland female adult (36 years)
  • date_created: 2015-09-15T20:27:46.454342+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR160CPS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (36 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR160CPS float

Histone_ChIP-seq_ENCSR160CPS
Histone_ChIP-seq ENCSR160CPS [biosample_summary="Homo sapiens myoepithelial cell of mammary gland female adult (36 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR160CPS [1.98, 14.7]
n
83,090,574
mean
5.41
sd
1.54

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 830905742.58% 178688
chr1 8467305 3.40% 17860
chr2 6403307 2.64% 14418
chr3 5478219 2.76% 12232
chr4 3333229 1.75% 7792
chr5 4191016 2.31% 9333
chr6 3755710 2.20% 8537
chr7 3925354 2.46% 8647
chr8 3040466 2.09% 6944
chr9 3522814 2.55% 7665
chr10 3758967 2.81% 8102
chr11 4568570 3.38% 9436
chr12 4762567 3.57% 9824
chr13 1580276 1.38% 3755
chr14 2843842 2.66% 6159
chr15 2963240 2.91% 6659
chr16 3679939 4.07% 7285
chr17 4500283 5.41% 9098
chr18 1576632 1.96% 3725
chr19 4559754 7.78% 8319
chr20 2531594 3.93% 5227
chr21 1020378 2.18% 2089
chr22 2084797 4.10% 4055
chrX 542315 0.35% 1527
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 178688 140 7100 465 362
global segment-length histogram

Files

Filename Size md5
ENCFF582YYK.bed.gz 3.08 MB 513eb1d542d14c990ec0c24b579ecb97
ENCFF582YYK.tabix.bed.gz 1.6 MB 9d9c520e386e675c8dda2bc73ff8c3f2
ENCFF582YYK.tabix.bed.gz.tbi 222.08 KB 99e5506c8b5d6051d1efbd4fb1fc5512
genomic_resource.yaml 2.07 KB 143a6f68395d31256f5f309b457c53bc
statistics/