Resource

Id Histone_ChIP-seq/ENCSR155YWBcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR155YWB [biosample_summary="Homo sapiens left lung tissue male adult (40 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR155YWB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002168/
  • biosample_summary: Homo sapiens left lung tissue male adult (40 years)
  • date_created: 2021-01-28T22:01:55.590285+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR155YWB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (40 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR155YWB float

Histone_ChIP-seq_ENCSR155YWB
Histone_ChIP-seq ENCSR155YWB [biosample_summary="Homo sapiens left lung tissue male adult (40 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR155YWB [1.67, 15.1]
n
152,897,127
mean
5.25
sd
1.84

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1528971274.75% 117002
chr1 15427155 6.20% 11576
chr2 12051219 4.98% 9397
chr3 9913336 5.00% 7811
chr4 5410292 2.84% 4732
chr5 7591419 4.18% 5949
chr6 8538591 5.00% 6826
chr7 6931393 4.35% 5721
chr8 6246619 4.30% 4977
chr9 6721676 4.86% 5067
chr10 7568604 5.66% 5717
chr11 8083285 5.98% 5894
chr12 7963220 5.98% 6044
chr13 3113924 2.72% 2717
chr14 5203783 4.86% 3895
chr15 5667507 5.56% 4153
chr16 5907152 6.54% 4365
chr17 9132071 10.97% 6288
chr18 2534069 3.15% 2150
chr19 6906614 11.78% 4854
chr20 4893009 7.59% 3401
chr21 1897515 4.06% 1379
chr22 3843874 7.56% 2714
chrX 1321691 0.85% 1340
chrY 29109 0.05% 35
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 117002 185 30682 1306.79 898
global segment-length histogram

Files

Filename Size md5
ENCFF516LPC.bed.gz 2.35 MB 03d2c90f7f3c94bd4502bd426ba03abf
ENCFF516LPC.tabix.bed.gz 1.15 MB 0f4123aa922a96ecbff31e131b5f39c5
ENCFF516LPC.tabix.bed.gz.tbi 262.57 KB 47ba12dd4ac59307270f45eb86af1863
genomic_resource.yaml 1.49 KB 8bd34a05669fe8265afcd823c5248b3b
statistics/