Resource

Id Histone_ChIP-seq/ENCSR155XVPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR155XVP [biosample_summary="Homo sapiens prostate gland tissue male adult (37 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR155XVP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002367/
  • biosample_summary: Homo sapiens prostate gland tissue male adult (37 years)
  • date_created: 2019-07-29T20:55:15.051630+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR155XVP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR155XVP float

Histone_ChIP-seq_ENCSR155XVP
Histone_ChIP-seq ENCSR155XVP [biosample_summary="Homo sapiens prostate gland tissue male adult (37 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR155XVP [1.17, 6.24]
n
15,596,633
mean
3.1
sd
0.603

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 155966330.48% 43362
chr1 1747431 0.70% 4695
chr2 1047513 0.43% 3113
chr3 883925 0.45% 2558
chr4 490999 0.26% 1528
chr5 645667 0.36% 1922
chr6 679399 0.40% 2057
chr7 620872 0.39% 1841
chr8 570171 0.39% 1660
chr9 783873 0.57% 2053
chr10 732966 0.55% 2098
chr11 940972 0.70% 2462
chr12 724262 0.54% 2034
chr13 262115 0.23% 830
chr14 572276 0.53% 1518
chr15 608211 0.60% 1674
chr16 726602 0.80% 1975
chr17 1132376 1.36% 2888
chr18 234047 0.29% 727
chr19 906034 1.55% 2270
chr20 497032 0.77% 1358
chr21 198979 0.43% 551
chr22 578699 1.14% 1502
chrX 12212 0.01% 48
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 43362 95 4767 359.68 296
global segment-length histogram

Files

Filename Size md5
ENCFF942RGZ.bed.gz 853.97 KB 8c2d82020d3fe0bba813037c45c77b3f
ENCFF942RGZ.tabix.bed.gz 432.25 KB 4cab87deaf01d137e8a1d7044b888ea6
ENCFF942RGZ.tabix.bed.gz.tbi 182.98 KB 27e062d7ea9f387f424360fa8ea68230
genomic_resource.yaml 1.5 KB 9472e0ab9c142cb27c44ae7859fba095
statistics/