Resource

Id Histone_ChIP-seq/ENCSR153NDQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR153NDQ [biosample_summary="Homo sapiens prostate gland tissue male adult (37 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR153NDQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002367/
  • biosample_summary: Homo sapiens prostate gland tissue male adult (37 years)
  • date_created: 2019-07-29T21:00:59.611037+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR153NDQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR153NDQ float

Histone_ChIP-seq_ENCSR153NDQ
Histone_ChIP-seq ENCSR153NDQ [biosample_summary="Homo sapiens prostate gland tissue male adult (37 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR153NDQ [1.17, 37.1]
n
38,080,667
mean
17.5
sd
8.32

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 380806671.18% 22258
chr1 3740152 1.50% 2196
chr2 2573280 1.06% 1468
chr3 2154529 1.09% 1220
chr4 1520672 0.80% 861
chr5 1758056 0.97% 991
chr6 2156954 1.26% 1225
chr7 1873493 1.18% 1117
chr8 1399769 0.96% 831
chr9 1582837 1.14% 950
chr10 1591425 1.19% 948
chr11 2076572 1.54% 1179
chr12 1962158 1.47% 1111
chr13 762144 0.67% 447
chr14 1260315 1.18% 698
chr15 1258757 1.23% 720
chr16 1507463 1.67% 885
chr17 2264067 2.72% 1313
chr18 677131 0.84% 407
chr19 2559670 4.37% 1607
chr20 1002720 1.56% 618
chr21 419802 0.90% 252
chr22 912056 1.79% 547
chrX 1023893 0.66% 646
chrY 42752 0.07% 21
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 22258 253 21376 1710.88 1526
global segment-length histogram

Files

Filename Size md5
ENCFF495DBS.bed.gz 632.5 KB aca3cf0b6a54ea5834a1fa2766eebc99
ENCFF495DBS.tabix.bed.gz 264.26 KB 10a8d5bfa12218a71dda3e53c57371ce
ENCFF495DBS.tabix.bed.gz.tbi 148.62 KB 37d153c23a7268a0a2e00653b16c4ac8
genomic_resource.yaml 1.5 KB 9f7437eb7211ab112a9c993ae9f42e2e
statistics/