Resource

Id Histone_ChIP-seq/ENCSR152MAZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR152MAZ [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (86 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR152MAZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with Alzheimer's disease; dorsolateral prefrontal cortex tissue female adult (86 years)
  • date_created: 2021-08-25T18:07:28.671875+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR152MAZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (86 years) with Alzheimer's disease
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR152MAZ float

Histone_ChIP-seq_ENCSR152MAZ
Histone_ChIP-seq ENCSR152MAZ [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (86 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR152MAZ [1.74, 57.4]
n
139,149,145
mean
9.42
sd
6.99

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1391491454.32% 89089
chr1 13890194 5.58% 8547
chr2 10202962 4.21% 6845
chr3 8594127 4.33% 5619
chr4 5443064 2.86% 3769
chr5 7361136 4.05% 4904
chr6 7302498 4.28% 4831
chr7 6377772 4.00% 4386
chr8 5635156 3.88% 3786
chr9 6689741 4.83% 4099
chr10 7304463 5.46% 4465
chr11 8458456 6.26% 5123
chr12 7016510 5.26% 4512
chr13 3218545 2.81% 2160
chr14 4774015 4.46% 3018
chr15 4919184 4.82% 3136
chr16 4908607 5.43% 3099
chr17 7858991 9.44% 4589
chr18 2712285 3.37% 1887
chr19 5579700 9.52% 3319
chr20 4057405 6.30% 2552
chr21 1479928 3.17% 988
chr22 3493299 6.87% 2084
chrX 1871107 1.20% 1371
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 89089 230 42015 1561.91 1045
global segment-length histogram

Files

Filename Size md5
ENCFF283LVU.bed.gz 1.95 MB baac3167ed7a3c58134841382633d35d
ENCFF283LVU.tabix.bed.gz 934.49 KB 3c05aac024c0fdfa1f15e7d88620d967
ENCFF283LVU.tabix.bed.gz.tbi 265.46 KB 6014c4eae8c02e2541df51ce04717635
genomic_resource.yaml 1.7 KB 9f335889c0f7d03931fa258e0c7a52fa
statistics/