Resource

Id Histone_ChIP-seq/ENCSR150YAUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR150YAU [biosample_summary="Homo sapiens sigmoid colon tissue female adult (53 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR150YAU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001159/
  • biosample_summary: Homo sapiens sigmoid colon tissue female adult (53 years)
  • date_created: 2016-10-19T23:13:16.744371+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR150YAU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR150YAU float

Histone_ChIP-seq_ENCSR150YAU
Histone_ChIP-seq ENCSR150YAU [biosample_summary="Homo sapiens sigmoid colon tissue female adult (53 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR150YAU [1.36, 9.34]
n
12,344,403
mean
3.8
sd
0.841

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 123444030.38% 33845
chr1 1317155 0.53% 3640
chr2 765991 0.32% 2234
chr3 634028 0.32% 1810
chr4 315748 0.17% 1004
chr5 472672 0.26% 1422
chr6 429714 0.25% 1286
chr7 492166 0.31% 1374
chr8 311996 0.21% 932
chr9 598312 0.43% 1614
chr10 496340 0.37% 1476
chr11 714880 0.53% 1911
chr12 823251 0.62% 2158
chr13 169762 0.15% 540
chr14 409771 0.38% 1185
chr15 422612 0.41% 1216
chr16 739898 0.82% 1887
chr17 832965 1.00% 2140
chr18 111303 0.14% 372
chr19 1246389 2.13% 2883
chr20 382516 0.59% 1063
chr21 138498 0.30% 375
chr22 415533 0.82% 1018
chrM 377 2.28% 1
chrX 102526 0.07% 304
3342 contigs with no values (186287931 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 33845 90 5557 364.73 293
global segment-length histogram

Files

Filename Size md5
ENCFF907QFE.bed.gz 652.94 KB f723c98076a0152fefb8c7fbc740da2e
ENCFF907QFE.tabix.bed.gz 331.36 KB 1ec7c2b19b76f480558bd03108ab5f7b
ENCFF907QFE.tabix.bed.gz.tbi 110.74 KB 3e001be01a56e663a3d633954f451c1b
genomic_resource.yaml 1.52 KB a328cf3e13a64b9410b2b6973999db23
statistics/