Resource

Id Histone_ChIP-seq/ENCSR146TGMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR146TGM [biosample_summary="Homo sapiens kidney tissue male adult (50 years)" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR146TGM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002113/
  • biosample_summary: Homo sapiens kidney tissue male adult (50 years)
  • date_created: 2015-09-15T19:52:21.147470+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR146TGM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (50 years)
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR146TGM float

Histone_ChIP-seq_ENCSR146TGM
Histone_ChIP-seq ENCSR146TGM [biosample_summary="Homo sapiens kidney tissue male adult (50 years)" and target="H3K9ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR146TGM [1.71, 35.7]
n
39,986,356
mean
7.8
sd
4.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 399863561.24% 42767
chr1 4312069 1.73% 4554
chr2 2840503 1.17% 2947
chr3 2331018 1.18% 2427
chr4 1565614 0.82% 1645
chr5 1836449 1.01% 1861
chr6 2183830 1.28% 2263
chr7 1760378 1.10% 1917
chr8 1360951 0.94% 1472
chr9 1757396 1.27% 1937
chr10 1837889 1.37% 1937
chr11 2190667 1.62% 2279
chr12 2210905 1.66% 2242
chr13 810941 0.71% 899
chr14 1318959 1.23% 1438
chr15 1294862 1.27% 1394
chr16 1588625 1.76% 1840
chr17 2557861 3.07% 2716
chr18 680805 0.85% 737
chr19 2227974 3.80% 2505
chr20 1051099 1.63% 1146
chr21 439640 0.94% 482
chr22 1004143 1.98% 1110
chrX 787031 0.50% 978
chrY 36747 0.06% 41
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 42767 220 12161 934.98 710
global segment-length histogram

Files

Filename Size md5
ENCFF280HID.bed.gz 981.82 KB 9bbf38eb85e1fdd6192efd07bb829077
ENCFF280HID.tabix.bed.gz 452.43 KB bd46f2ed1bd5ee1cf58bfea34fba7324
ENCFF280HID.tabix.bed.gz.tbi 170.74 KB f1843e722b8a628f4b0f78cb6ed917c4
genomic_resource.yaml 1.48 KB 1be7f48f0fd7136d9bf8b955505f5df1
statistics/