Resource

Id Histone_ChIP-seq/ENCSR143MZLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR143MZL [biosample_summary="Homo sapiens brain tissue male embryo (122 days)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR143MZL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000955/
  • biosample_summary: Homo sapiens brain tissue male embryo (122 days)
  • date_created: 2015-09-15T19:51:52.856007+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR143MZL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (122 days)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR143MZL float

Histone_ChIP-seq_ENCSR143MZL
Histone_ChIP-seq ENCSR143MZL [biosample_summary="Homo sapiens brain tissue male embryo (122 days)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR143MZL [2.05, 26.6]
n
11,792,877
mean
6.67
sd
2.91

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 117928770.37% 38795
chr1 1226164 0.49% 3849
chr2 891067 0.37% 2833
chr3 740724 0.37% 2296
chr4 545639 0.29% 1668
chr5 679175 0.37% 2050
chr6 804667 0.47% 2493
chr7 550673 0.35% 1873
chr8 457043 0.31% 1551
chr9 458251 0.33% 1619
chr10 480138 0.36% 1648
chr11 633457 0.47% 2072
chr12 665199 0.50% 2120
chr13 282544 0.25% 908
chr14 429906 0.40% 1318
chr15 390939 0.38% 1271
chr16 362906 0.40% 1319
chr17 543748 0.65% 1894
chr18 208566 0.26% 722
chr19 612332 1.04% 2220
chr20 257838 0.40% 903
chr21 110884 0.24% 396
chr22 203816 0.40% 743
chrX 239287 0.15% 963
chrY 17914 0.03% 66
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 38795 105 4751 303.98 219
global segment-length histogram

Files

Filename Size md5
ENCFF415WPZ.bed.gz 712.67 KB 16cfd629eb89e0d20f49498af7d77b59
ENCFF415WPZ.tabix.bed.gz 368.29 KB 0f59d574db888a77b6e95216541d457d
ENCFF415WPZ.tabix.bed.gz.tbi 148.49 KB 0ead9d470200c9fb72bbd38c8bf7447d
genomic_resource.yaml 1.49 KB ceac4630a257058ed530a57aa458de2c
statistics/