Resource

Id Histone_ChIP-seq/ENCSR133RZOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR133RZO [biosample_summary="Homo sapiens pancreas tissue female child (16 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR133RZO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001264/
  • biosample_summary: Homo sapiens pancreas tissue female child (16 years)
  • date_created: 2021-04-30T04:17:45.640582+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR133RZO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female child (16 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR133RZO float

Histone_ChIP-seq_ENCSR133RZO
Histone_ChIP-seq ENCSR133RZO [biosample_summary="Homo sapiens pancreas tissue female child (16 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR133RZO [1.7, 4.7]
n
889,250
mean
2.96
sd
0.435

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 8892500.03% 2237
chr1 51667 0.02% 127
chr2 66430 0.03% 161
chr3 40260 0.02% 94
chr4 41377 0.02% 106
chr5 53479 0.03% 126
chr6 68612 0.04% 167
chr7 56908 0.04% 123
chr8 35985 0.02% 95
chr9 34009 0.02% 81
chr10 43305 0.03% 108
chr11 21159 0.02% 59
chr12 25227 0.02% 63
chr13 37085 0.03% 85
chr14 31699 0.03% 73
chr15 21922 0.02% 49
chr16 16997 0.02% 44
chr17 41238 0.05% 94
chr18 15862 0.02% 42
chr19 12263 0.02% 30
chr20 16228 0.03% 44
chr21 7779 0.02% 18
chr22 3348 0.01% 9
chrX 146411 0.09% 439
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 2237 215 2259 397.52 345
global segment-length histogram

Files

Filename Size md5
ENCFF635JIA.bed.gz 39.53 KB 2a41c04233d7ba1cac7b73b912161d50
ENCFF635JIA.tabix.bed.gz 22.64 KB 71b93cd17ef7f1aca97b2c221325c2d4
ENCFF635JIA.tabix.bed.gz.tbi 22.01 KB da5bc529892f7beb14aa7c452d485b9c
genomic_resource.yaml 1.5 KB b144d3064bf3dbef170cad6862d8ff12
statistics/