Resource

Id Histone_ChIP-seq/ENCSR133NBJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR133NBJ [biosample_summary="Homo sapiens stomach tissue female adult (53 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR133NBJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000945/
  • biosample_summary: Homo sapiens stomach tissue female adult (53 years)
  • date_created: 2016-10-19T23:14:20.276757+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR133NBJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR133NBJ float

Histone_ChIP-seq_ENCSR133NBJ
Histone_ChIP-seq ENCSR133NBJ [biosample_summary="Homo sapiens stomach tissue female adult (53 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR133NBJ [1.72, 98.4]
n
142,806,690
mean
16.1
sd
14.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1428066904.44% 73359
chr1 14851345 5.97% 7375
chr2 10854528 4.48% 5824
chr3 8998010 4.54% 4744
chr4 5869654 3.09% 3283
chr5 7150047 3.94% 3767
chr6 7851130 4.60% 4286
chr7 6296983 3.95% 3447
chr8 5863365 4.04% 3208
chr9 6517855 4.71% 3334
chr10 6955183 5.20% 3498
chr11 7550688 5.59% 3566
chr12 7098421 5.33% 3601
chr13 3079633 2.69% 1734
chr14 4919901 4.60% 2438
chr15 4999778 4.90% 2538
chr16 5389173 5.97% 2743
chr17 7924064 9.52% 3663
chr18 2587527 3.22% 1401
chr19 5927469 10.11% 2716
chr20 4130778 6.41% 2084
chr21 1980914 4.24% 1021
chr22 3538039 6.96% 1610
chrX 2471242 1.58% 1477
chrY 963 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 73359 275 70730 1946.68 1361
global segment-length histogram

Files

Filename Size md5
ENCFF868AQH.bed.gz 1.76 MB 02e2c8a4654373a290d0b77830d0dfb7
ENCFF868AQH.tabix.bed.gz 805.57 KB ab16272130953e3c4bece6416981a440
ENCFF868AQH.tabix.bed.gz.tbi 237.02 KB 05b3b3439b6cc4c603bdcc16be348c0d
genomic_resource.yaml 1.5 KB 7223df924f15966577a12646fe80e069
statistics/