Resource
| Id | Histone_ChIP-seq/ENCSR131EHC |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | Histone_ChIP-seq ENCSR131EHC [biosample_summary="Homo sapiens BLaER1 168 hours after the\ \ sample was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10\ \ ng/mL CSF1" and target="H3K4me2"] |
| Description |
status: released biological_replicates: Rep 1 summary: 168 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1 output_type: peaks audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-joint-replicate-peak-calling-step-v-1|/analysis-steps/crg-chip-seq-joint-replicate-peak-calling-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-alignment-and-filtering-step-v-1|/analysis-steps/crg-chip-seq-alignment-and-filtering-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-bed-to-bigbed-conversion-step-v-1|/analysis-steps/crg-chip-seq-bed-to-bigbed-conversion-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} audit_internal_action: Released analysis step version {crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0|/analysis-step-versions/crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR131EHC | float |
Histone_ChIP-seq_ENCSR131EHC |
Histone_ChIP-seq ENCSR131EHC [biosample_summary="Homo sapiens BLaER1 168 hours after the\ \ sample was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10\ \ ng/mL CSF1" and target="H3K4me2"]
|
 |
[1.34, 30.8] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 227212220 | 7.06% | 230339 |
| chr1 | 21844110 | 8.77% | 21468 |
| chr1_KI270710v1_random | 252 | 0.63% | 1 |
| chr1_KI270711v1_random | 568 | 1.35% | 2 |
| chr1_KI270712v1_random | 2720 | 1.55% | 7 |
| chr1_KI270713v1_random | 4058 | 9.96% | 7 |
| chr1_KI270714v1_random | 502 | 1.20% | 2 |
| chr2 | 17405270 | 7.19% | 18731 |
| chr3 | 13309553 | 6.71% | 14427 |
| chr3_GL000221v1_random | 1279 | 0.82% | 4 |
| chr4 | 8686151 | 4.57% | 10432 |
| chr5 | 11428096 | 6.30% | 12418 |
| chr6 | 12094301 | 7.08% | 13110 |
| chr7 | 11020725 | 6.92% | 11992 |
| chr8 | 11134564 | 7.67% | 11444 |
| chr9 | 9623351 | 6.95% | 9677 |
| chr9_KI270719v1_random | 624 | 0.35% | 2 |
| chr9_KI270720v1_random | 260 | 0.67% | 1 |
| chr10 | 11329790 | 8.47% | 11534 |
| chr11 | 11918286 | 8.82% | 11435 |
| chr12 | 11018521 | 8.27% | 10994 |
| chr13 | 4555217 | 3.98% | 5394 |
| chr14 | 7546693 | 7.05% | 7354 |
| chr14_GL000009v2_random | 540 | 0.27% | 1 |
| chr14_GL000194v1_random | 2182 | 1.14% | 3 |
| chr14_KI270723v1_random | 1087 | 2.85% | 3 |
| chr14_KI270724v1_random | 283 | 0.72% | 1 |
| chr14_KI270725v1_random | 556 | 0.32% | 1 |
| chr14_KI270726v1_random | 457 | 1.04% | 1 |
| chr15 | 7895575 | 7.74% | 7762 |
| chr15_KI270727v1_random | 904 | 0.20% | 2 |
| chr16 | 9239996 | 10.23% | 8342 |
| chr16_KI270728v1_random | 1422 | 0.08% | 3 |
| chr17 | 12489292 | 15.00% | 10602 |
| chr17_GL000205v2_random | 24924 | 13.43% | 15 |
| chr17_KI270729v1_random | 265 | 0.09% | 1 |
| chr18 | 4231466 | 5.26% | 4858 |
| chr19 | 9831148 | 16.77% | 7537 |
| chr20 | 7229483 | 11.22% | 6833 |
| chr21 | 3088825 | 6.61% | 3182 |
| chr22 | 5436967 | 10.70% | 4802 |
| chr22_KI270731v1_random | 1693 | 1.12% | 4 |
| chr22_KI270733v1_random | 3844 | 2.14% | 8 |
| chr22_KI270734v1_random | 254 | 0.15% | 1 |
| chr22_KI270735v1_random | 1181 | 2.76% | 2 |
| chrUn_GL000195v1 | 4910 | 2.68% | 10 |
| chrUn_GL000214v1 | 514 | 0.37% | 2 |
| chrUn_GL000216v2 | 384 | 0.22% | 1 |
| chrUn_GL000219v1 | 14076 | 7.85% | 22 |
| chrUn_GL000220v1 | 701 | 0.43% | 2 |
| chrUn_KI270438v1 | 303 | 0.27% | 1 |
| chrUn_KI270442v1 | 275 | 0.07% | 1 |
| chrUn_KI270742v1 | 265 | 0.14% | 1 |
| chrUn_KI270744v1 | 5135 | 3.05% | 9 |
| chrUn_KI270750v1 | 290 | 0.19% | 1 |
| chrUn_KI270751v1 | 1075 | 0.71% | 2 |
| chrUn_KI270753v1 | 2921 | 4.64% | 6 |
| chrUn_KI270755v1 | 309 | 0.84% | 1 |
| chrX | 4772006 | 3.06% | 5876 |
| chrY | 1821 | <0.01% | 4 |
| 3307 contigs with no values (122254423 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 230339 | 250 | 39319 | 986.43 | 587 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF539OIC.bed.gz | 4.9 MB | 8a20e3ea9158aadc5e364c7f05350c02 |
| ENCFF539OIC.tabix.bed.gz | 2.28 MB | a75359b9220ade5d6fef4c20c9eb2c1c |
| ENCFF539OIC.tabix.bed.gz.tbi | 440.56 KB | f599edc425e2e040457db1db2fdaa82d |
| genomic_resource.yaml | 3.12 KB | 4f3e30b9c585b2c31d1c4d552a0257d9 |
| statistics/ |