Resource

Id Histone_ChIP-seq/ENCSR128VHVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR128VHV [biosample_summary="Homo sapiens aorta tissue female adult (30 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR128VHV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000947/
  • biosample_summary: Homo sapiens aorta tissue female adult (30 years)
  • date_created: 2015-10-01T07:15:59.337212+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR128VHV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (30 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR128VHV float

Histone_ChIP-seq_ENCSR128VHV
Histone_ChIP-seq ENCSR128VHV [biosample_summary="Homo sapiens aorta tissue female adult (30 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR128VHV [2.03, 6.3]
n
1,748,822
mean
3.76
sd
0.538

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 17488220.05% 5928
chr1 116163 0.05% 398
chr2 142330 0.06% 487
chr3 102936 0.05% 351
chr4 110192 0.06% 384
chr5 89890 0.05% 315
chr6 110790 0.06% 381
chr7 86689 0.05% 295
chr8 100612 0.07% 346
chr9 59463 0.04% 201
chr10 67805 0.05% 228
chr11 76810 0.06% 258
chr12 64203 0.05% 220
chr13 46852 0.04% 164
chr14 54090 0.05% 185
chr15 38500 0.04% 134
chr16 40282 0.04% 136
chr17 32860 0.04% 110
chr17_GL000205v2_random 1950 1.05% 4
chr18 46948 0.06% 160
chr19 12864 0.02% 43
chr20 34842 0.05% 115
chr21 14477 0.03% 54
chr22 9843 0.02% 29
chrUn_GL000195v1 845 0.46% 1
chrUn_KI270750v1 437 0.29% 1
chrX 286149 0.18% 928
3340 contigs with no values (185787163 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 5928 190 956 295.01 273
global segment-length histogram

Files

Filename Size md5
ENCFF887VHI.bed.gz 96.37 KB c2425915f1a7b2d334cb430f79416696
ENCFF887VHI.tabix.bed.gz 53.37 KB d2c998fe54097e6b685eb08292a0467f
ENCFF887VHI.tabix.bed.gz.tbi 57.91 KB d442b9f4fb4a69bcd94644172b21bd08
genomic_resource.yaml 1.98 KB 502ba571539185978912a985271fec80
statistics/