Resource

Id Histone_ChIP-seq/ENCSR128KIHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR128KIH [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR128KIH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0001059/
  • biosample_summary: Homo sapiens common myeloid progenitor, CD34-positive
  • date_created: 2015-09-15T19:49:14.370436+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR128KIH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: anisogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment: Experiment cd6845bd-e6d5-472e-b134-e3be9c050cca merged into ENCSR128KIH.
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR128KIH float

Histone_ChIP-seq_ENCSR128KIH
Histone_ChIP-seq ENCSR128KIH [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR128KIH [1.63, 12]
n
13,296,042
mean
3.02
sd
0.762

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 132960420.41% 50499
chr1 980029 0.39% 3681
chr2 1064980 0.44% 4087
chr3 886865 0.45% 3477
chr4 892729 0.47% 3535
chr5 885193 0.49% 3449
chr6 781207 0.46% 3044
chr7 781521 0.49% 2928
chr8 627197 0.43% 2397
chr9 468927 0.34% 1798
chr10 662245 0.49% 2419
chr11 590000 0.44% 2287
chr12 624072 0.47% 2372
chr13 439456 0.38% 1776
chr14 386897 0.36% 1508
chr15 362043 0.35% 1363
chr16 303489 0.34% 1070
chr17 217195 0.26% 811
chr18 305007 0.38% 1206
chr19 925528 1.58% 2846
chr20 185191 0.29% 710
chr21 219257 0.47% 787
chr22 77958 0.15% 290
chrX 606495 0.39% 2575
chrY 22561 0.04% 83
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 50499 180 2791 263.29 201
global segment-length histogram

Files

Filename Size md5
ENCFF099UXQ.bed.gz 728.09 KB d824a3d7853d033ad9aa1e7ba3ea2e7c
ENCFF099UXQ.tabix.bed.gz 408.59 KB da3da3bcd829e8263cae6054b16d78eb
ENCFF099UXQ.tabix.bed.gz.tbi 257.16 KB 53e927d481776ecdd0595d3249abcdba
genomic_resource.yaml 2.05 KB 9c591cda79aae5786d4caa887b25809f
statistics/