Resource

Id Histone_ChIP-seq/ENCSR124AZRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR124AZR [biosample_summary="Homo sapiens uterus tissue female adult (51 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR124AZR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000995/
  • biosample_summary: Homo sapiens uterus tissue female adult (51 years)
  • date_created: 2018-05-11T18:45:30.797653+00:00
  • date_released: 2018-12-11
  • doi: 10.17989/ENCSR124AZR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR124AZR float

Histone_ChIP-seq_ENCSR124AZR
Histone_ChIP-seq ENCSR124AZR [biosample_summary="Homo sapiens uterus tissue female adult (51 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR124AZR [1.67, 8.74]
n
20,301,986
mean
3.5
sd
0.698

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 203019860.63% 27682
chr1 2194050 0.88% 2940
chr2 1494291 0.62% 2122
chr3 1114017 0.56% 1640
chr4 521158 0.27% 761
chr5 830372 0.46% 1174
chr6 750843 0.44% 1149
chr7 827940 0.52% 1191
chr8 708801 0.49% 990
chr9 1086698 0.79% 1416
chr10 1103175 0.82% 1479
chr11 1262195 0.93% 1681
chr12 964916 0.72% 1319
chr13 332688 0.29% 496
chr14 720122 0.67% 943
chr15 691079 0.68% 976
chr16 976299 1.08% 1248
chr17 1461728 1.76% 1839
chr18 313451 0.39% 463
chr19 1348363 2.30% 1677
chr20 634081 0.98% 878
chr21 188424 0.40% 271
chr22 706110 1.39% 899
chrX 71185 0.05% 130
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 27682 220 5861 733.4 621
global segment-length histogram

Files

Filename Size md5
ENCFF150BRF.bed.gz 587.29 KB d8c7835d523e206d82095a103a6f727c
ENCFF150BRF.tabix.bed.gz 292.99 KB bc55f2f203e4efa5c9fc0828d78f6e03
ENCFF150BRF.tabix.bed.gz.tbi 138.95 KB 1179b31f073bec444e794d43e9150068
genomic_resource.yaml 1.71 KB f516fb5804859065225667bbc1579fee
statistics/